Pairwise Alignments

Query, 181 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

Subject, 193 a.a., RNA polymerase sigma E factor from Pseudomonas putida KT2440

 Score = 91.3 bits (225), Expect = 9e-24
 Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 14/181 (7%)

Query: 10  DSDDVRAAAAGDRQAFQRLYRLHVGRVHGAVCRLAGYDHARAEDLTQDAFIRAWQKLPGF 69
           D   V     GDR+AF  L   +  ++ G + R   +D   A+D+ Q+AFI+A++ L  F
Sbjct: 7   DQQLVERVQRGDRRAFDLLVLKYQHKILGLIVRFV-HDTHEAQDVAQEAFIKAYRALGNF 65

Query: 70  RHESAFGTWLYRLAVNVALMDIRARGADP---------VSMLDDEHLPDTGQTPFCAAER 120
           R +SAF TWLYR+A+N A   + +RG  P             D +H     ++P  +  R
Sbjct: 66  RGDSAFYTWLYRIAINTAKNYLVSRGRRPPDSDVSSEDAEFYDGDHGLKDLESPERSLLR 125

Query: 121 EELE----RAIARLPPRARAVLVLHDIEGWRHEEIGGELGMAIGTSKAQLHRARALLRKI 176
           +E+E    R I +LP   R  L L + +G  +E+I   +   +GT ++++ RAR  + K 
Sbjct: 126 DEIEGTVHRTIQQLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRIFRAREAIDKA 185

Query: 177 L 177
           L
Sbjct: 186 L 186