Pairwise Alignments

Query, 192 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

Subject, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 59.3 bits (142), Expect = 4e-14
 Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 4/184 (2%)

Query: 1   MDDIRSDPDRELVDAVLANRPGAFERLVREYQGLCWHIIQRMVRNPEDARELCQDTFLRV 60
           M D+  + D+  V+A+      AF  L R+Y    +HI ++M    EDA  + Q+ F+++
Sbjct: 1   MLDLGKNSDKVAVNALRGGSEEAFNVLFRKYSKKIYHISRKMSLGHEDAEGIVQEVFIKI 60

Query: 61  HQCLHQYRGESALKSWIGRVAYTIALRHLQHKRIALVEPGADNDFALVENLGDGFDLEAA 120
            +   Q     +  +++  +  +I +R LQ K        A   ++L          E  
Sbjct: 61  WKNRQQLDSTLSFNAYLIAIVRSIVIRQLQRK----ANLTAYKKYSLQRMEDWDNQTEDQ 116

Query: 121 CADAETARHLHAAIEALPPLQRTLLTLYYLEETTIPEIAQITGLASGTIKSHLFRSRLRL 180
              +E        ++ LPP Q+ +  +  LE+ ++ EIA+   ++  T+K+ +FR+   +
Sbjct: 117 VIFSEMMNVSSKVMDTLPPGQKRVFLMRNLEDMSLDEIAEKLQVSKKTVKNQVFRANKAM 176

Query: 181 RGAL 184
           R +L
Sbjct: 177 RLSL 180