Pairwise Alignments

Query, 192 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

Subject, 199 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 56.2 bits (134), Expect = 4e-13
 Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 8/161 (4%)

Query: 23  AFERLVRE-YQGLCWHIIQRMVRNPEDARELCQDTFLRVHQCLHQYRGESALKSWIGRVA 81
           +F+R+  E Y GLC++  +R++++  DA ++ ++ F+++ Q   ++     L+S++ +  
Sbjct: 20  SFDRVFEEFYPGLCFYA-ERILQSKTDAEDVVENLFVKLWQKKMEFSSRDHLRSFLYKST 78

Query: 82  YTIALRHLQHKRIALVEPGADNDFALVENLGDGFDLEAA-CADAETARHLHAAIEALPPL 140
               L  ++          A+ +   ++   D           AE  R +H AIE+LP  
Sbjct: 79  KNACLDFIK-----TAARSAERNSHFLDTAEDYTKSHLTNMIRAEVIREIHQAIESLPAQ 133

Query: 141 QRTLLTLYYLEETTIPEIAQITGLASGTIKSHLFRSRLRLR 181
             T++   Y+E  ++PEIAQ   L+  T+K+H  R    LR
Sbjct: 134 CGTVIRKSYIEGLSLPEIAQEMSLSVQTVKNHKLRGLAILR 174