Pairwise Alignments

Query, 288 a.a., RNA polymerase sigma factor RpoH from Rhodanobacter sp000427505 FW510-R12

Subject, 289 a.a., RNA polymerase sigma factor RpoH from Acinetobacter radioresistens SK82

 Score =  302 bits (774), Expect = 5e-87
 Identities = 158/282 (56%), Positives = 202/282 (71%), Gaps = 3/282 (1%)

Query: 7   ITPSNLPSVVGSLDAYISAVHRIPVLSQEEEQALSRDYLEEANLAAAKKLVMSHLRFVVH 66
           + P +L +   +L AYIS V++IP+L+ E+E+ L+  Y  + +L AAK LVMSHLRFVVH
Sbjct: 8   LMPLSLSAPGVNLGAYISTVNQIPILTAEQEKELAERYYYDQDLDAAKMLVMSHLRFVVH 67

Query: 67  VARGYSGYGLQLADLIQEGNIGLMKAVKRFDPDQGVRLVSFAVHWIRAEMHEFILKNWRI 126
           +AR Y+GYGL   DLIQEGN+GLMKAVKRFDP  GVRLVSFAVHWI+AE+HE++++NWRI
Sbjct: 68  IARSYAGYGLPQGDLIQEGNLGLMKAVKRFDPSMGVRLVSFAVHWIKAEIHEYVIRNWRI 127

Query: 127 VKVATTKAQRKLFFNLRKSKKRLGWMNAAEVSTVAKDLGVPEATVREMESRLSGRDIGFE 186
           VK+ATTKAQRKLFFNLR  KK    +   E  ++A DL V    V EME RL+  D  FE
Sbjct: 128 VKIATTKAQRKLFFNLRSLKKSSKKLTLEEARSIANDLNVTPEQVLEMEGRLTAYDAAFE 187

Query: 187 APVDADDDAKP--APAAFLVDDGADPYQNVADEDYADNQMETLNDALAHLDPRSRDIIQR 244
           A  D DDD+    AP  +L D   DP + V DED+ +     L++A+  LD RSR+I+QR
Sbjct: 188 AQGDDDDDSSSHVAPVLYLEDSRYDPARLVEDEDWEEQSNSALHNAMDQLDDRSRNILQR 247

Query: 245 RWLDDSSKATLQDLADEYGVSAERIRQIEANAMKKMRGLFAT 286
           RWLDD  K+TL +LA EY VSAERIRQ+E NAM+K++   +T
Sbjct: 248 RWLDD-DKSTLHELAAEYNVSAERIRQLEKNAMEKIKVAMST 288