Pairwise Alignments

Query, 338 a.a., HlyD family secretion protein from Rhodanobacter sp000427505 FW510-R12

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score =  129 bits (324), Expect = 1e-34
 Identities = 101/327 (30%), Positives = 154/327 (47%), Gaps = 22/327 (6%)

Query: 16  VVIVAALLGHALWKHY-LYSPW---TRDGRVRAEVVRIAPDVSGLVSAVAVSDNQLVRKG 71
           ++++  L G   W  Y +   W   T D  V   VV I P V+G V+++   D  LV  G
Sbjct: 27  LLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGNVVEITPLVAGTVTSIGADDGDLVHAG 86

Query: 72  DPLFAIDPARFRYAVDQAQANLDAAEASARAAGANISAALASAAARKAEYQMRAEEAARR 131
             L   DPA    A+  A+A L  +    R   +N+ +  A    R+AE +   ++  RR
Sbjct: 87  QVLLQFDPADSEVALQSAEAKLARSVRQVRGLYSNVDSLKAQLETRQAELRKAQQDFNRR 146

Query: 132 QHLGD--VITREERTDAAAVANSARATWAQARAGGSQASAVREQAQAA----VEQAQVAL 185
           + L D   I  EE + A    + A+A    AR   S +SA+ +    +    V  A   L
Sbjct: 147 KVLADSGAIAAEELSHARDDLSVAQAAVNSARQQLSTSSALVDDTVVSSHPDVMAAAADL 206

Query: 186 DRARLDLERTEVRAPVDGYVTNLDVRVGDYAATGSPRLALIDSHSYYLYGYFEETKLPQL 245
            +A LD  RT + APV GYV    V++G     G+  +A+I     ++   F+ET+L ++
Sbjct: 207 RQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQPGTATMAVIPLDQVWIDANFKETQLREM 266

Query: 246 HVGDPVDIRLMAGG--VRLKGTITGIARGITDRDNPTGN--DLLADVNPTFNWVRLAQRV 301
            +G PV+I     G  V+  GT+  +  G       TG+   LL   N T NW+++ QRV
Sbjct: 267 RIGQPVEITADVYGSEVKYSGTVDSLGAG-------TGSAFALLPAQNATGNWIKIVQRV 319

Query: 302 PVRIAIDTSHLPDDTLIAAGMTATIEV 328
           PVRI +    L D  L   G++  +EV
Sbjct: 320 PVRIHLSPDQLKDHPL-RIGLSTVVEV 345