Pairwise Alignments

Query, 235 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

Subject, 219 a.a., pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) from Escherichia coli BW25113

 Score =  104 bits (260), Expect = 1e-27
 Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 12/216 (5%)

Query: 2   LDILYQDDALIAVNKPANLAVHRSKMVGNAEEFLIDLLREQV-GDSVYLAHRLDRATSGV 60
           L ILYQDD ++ VNKP+ L     ++  + +  +  + R+    +SV   HRLD ATSGV
Sbjct: 14  LVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESV---HRLDMATSGV 70

Query: 61  LLVARSKEVAAALGGQFMGRLMHKRYLAVVRGWPEPAEGVIDYPLPGSRETGPRREARTH 120
           ++VA +K     L  QF  R   K+Y+A V G P PAEG++D PL       P+++    
Sbjct: 71  IVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYE 130

Query: 121 YRRLATVGVPIALGRYPQQRYALLLAEPESGRFRQIRKHLAHIHHPVIGDCQHGRGDHNR 180
             + A     +    Y     A ++ +P +GR  Q+R H+  + HP++GD  +   +   
Sbjct: 131 TGKPAQTEYEVV--EYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARA 188

Query: 181 LYKQHFGCHRMLLHAWRLDFRHPQTSESMSLQAPLD 216
           +        R+LLHA  L   HP    SM+ +AP D
Sbjct: 189 M------APRLLLHAEMLTITHPAYGNSMTFKAPAD 218