Pairwise Alignments

Query, 459 a.a., ATP-dependent RNA helicase DbpA from Rhodanobacter sp000427505 FW510-R12

Subject, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

 Score =  256 bits (655), Expect = 8e-73
 Identities = 150/367 (40%), Positives = 215/367 (58%), Gaps = 6/367 (1%)

Query: 4   FSTLPLKPALLASVDTLGYAEMTPVQAQSLPPMLQGRDVIAQAQTGSGKTAAFGLSLLQ- 62
           F+ L L   LL ++  L Y   TPVQA+++P +L GRD++A AQTG+GKTA F L +LQ 
Sbjct: 3   FAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVLQR 62

Query: 63  -ALDADTIR---LQALVLCPTRELADQVSKAIRKLAANIPNVKLLTLCGGMPLGPQLASL 118
            AL+ + +    ++ALVL PTRELA+QV   +R+ A N+P +    + GG+ + PQ+  L
Sbjct: 63  LALEGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLP-LTTYAVYGGVSINPQMMRL 121

Query: 119 SHDPHIVVGTPGRVQEHLKRGSLHGGGIKVLVLDEADRMLDMGFSEAIDDIIGRIAKHHQ 178
                ++V TPGR+ +  ++ ++    ++ LVLDEADRMLD+GF+E +  +   + +  Q
Sbjct: 122 RRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRKRQ 181

Query: 179 TLLFSATYPDEIRAASQRVQKDPVVVTVEAPAARRSAIEQQFIEVEPAQKLDALAQLLAG 238
           TLLFSAT+ D+IR  +     DP+ + V    A  ++++Q  + V+  +K D    LL  
Sbjct: 182 TLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKADLFCHLLRK 241

Query: 239 ERGQHALVFCNMRRDVDAVAQELDRRGYSALALHGDMEQRDRDEVLVRFANRSCNVLVAT 298
           +R +  LVF   R  VD + + L   G +A  +HGD  Q  R   L  F  R   VLVAT
Sbjct: 242 QRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQVLVAT 301

Query: 299 DVAARGLDIAALPLVLSYDVAHDPDTHTHRIGRTGRAGETGLAITLCTPRERPKAANIEE 358
           DVAARGLDI  LPLV++ D+    + + HRIGRTGRAG  G AI+L    E    A IE 
Sbjct: 302 DVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQLLAAIEV 361

Query: 359 AQGVPLP 365
                LP
Sbjct: 362 LTRQTLP 368