Pairwise Alignments

Query, 416 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  272 bits (695), Expect = 2e-77
 Identities = 170/418 (40%), Positives = 241/418 (57%), Gaps = 14/418 (3%)

Query: 3   RFWKIALIVVAVVVVAAVGFRLLHKPAPA----GAASTQAASKNKGGKDG-KDETPPVPV 57
           R W + L+++  ++VAA+ + L     PA    G           GG+ G    + PVPV
Sbjct: 10  RRWLVGLLIL--LLVAALAWWLWPAATPAHKEAGGVRGGKGMGMIGGRPGFGGSSDPVPV 67

Query: 58  TVVPVVKQNVPVYLTALGTVQALNTVTVNPQVGGQLLSLHFSEGQPVKKGQLLAQIDPRI 117
            VVPV   + P+Y  ALGTV A NTV V  +V G+L+ +HF EGQ VK G LLA+IDPR 
Sbjct: 68  RVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRP 127

Query: 118 YQAAYDQAVARQRQDQALAATAKSNLTRSRDLAAKGYISKQDLDTLRNTAAQYEAAVAAD 177
           Y+ A  QA     Q+QA    A+ +L R + L A+  I+KQ LDT     AQ++  V  +
Sbjct: 128 YRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTN 187

Query: 178 AANVRDTQVQLNYTRVLSPIDSLAGIRAVDPGNVVTT--SSAIVTLTQLHPINVMFTLPE 235
            A V D ++ L++T++ +PI    G+R +D GN+V    ++A+V +TQ  PINV FTLPE
Sbjct: 188 QAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTLPE 247

Query: 236 QNLDMVRRAAAKDGAALQVTALDRTDAHPIADGGVLKVVDNQIDTSTGTFRLKSEFPNAN 295
             L  V     + GA+L V A DR D+  +   GVL  +DNQIDT+TGT + K  F N +
Sbjct: 248 TELSTVLE-RYRSGASLPVEAWDRGDS-KLQSTGVLGSIDNQIDTTTGTLKFKGRFENKD 305

Query: 296 NELWPGQFVNVRLLVNTVDGGLVIPAQAVQRGPDGDYVYQVQADSTVKMQAVTVAGEVGD 355
             L+P QFVNVRLL +T+   ++ PA A+Q G DG + Y V   STV ++ + V    G+
Sbjct: 306 LALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASDGE 365

Query: 356 SHVMVGSGLKAGDRVVTEGQFRLKPGSKVNALKPGEVPAAPTAAELEKAKQNAKGGGR 413
           + V++  GLKAGDR+V EG  RL+ G+KV  ++  +    PT+       Q AKG  +
Sbjct: 366 NSVIL-DGLKAGDRLVLEGTDRLREGTKVEVVE--DSSQVPTSPGQHLQGQEAKGAAQ 420