Pairwise Alignments

Query, 416 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 388 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  224 bits (572), Expect = 3e-63
 Identities = 144/360 (40%), Positives = 207/360 (57%), Gaps = 9/360 (2%)

Query: 54  PVPVTVVPVVKQNVPVYLTALGTVQALNTVTVNPQVGGQLLSLHFSEGQPVKKGQLLAQI 113
           PV V V P   ++  V   A+GTV   NTVTV  +V GQL  +   EGQ V +GQLLA+I
Sbjct: 34  PVAVRVEPARTEDFTVQARAVGTVAPYNTVTVRSRVDGQLARVLVREGQKVARGQLLAEI 93

Query: 114 DPRIYQAAYDQAVARQRQDQALAATAKSNLTRSRDLAAKGYISKQDLDTLRNTAAQYEAA 173
           DP   + A  QA  +Q+Q+ A    A+S L R   L  +  +++Q LD       Q    
Sbjct: 94  DPEPLRVALAQAQGQQQQNLAQLRNAESELARYELLFKRDAVARQVLDRQAALVQQLRGT 153

Query: 174 VAADAANVRDTQVQLNYTRVLSPIDSLAGIRAVDPGNVVTTSSA--IVTLTQLHPINVMF 231
           + +D A V + ++QL+YTR+++PI    G+R VD GN+++ + A  + TLTQ  P++V+F
Sbjct: 154 LKSDEAQVDNAKLQLSYTRIVAPIAGRIGLRRVDAGNLLSANDANGLFTLTQTQPVSVVF 213

Query: 232 TLPEQNLDMVRRAAAKDG-AALQVTALDRTDAHPIADGGVLKVVDNQIDTSTGTFRLKSE 290
            +PE  +  VR  AA DG    Q  A DR +   +A G  L  +DNQID +TGT RLK+ 
Sbjct: 214 NVPEPQVAEVR--AAHDGKQPPQAEAWDRDNRSRLAQGR-LDTLDNQIDAATGTLRLKAR 270

Query: 291 FPNANNELWPGQFVNVRLLVNTVDGGLVIPAQAVQRGPDGDYVYQVQADSTVKMQAVTVA 350
           F NA++ L+P QFVNVRL +  + G + IP  AVQ G  G YVY V AD+  +++ +T+ 
Sbjct: 271 FENADDALFPNQFVNVRLALRQLPGAVTIPTDAVQHGSRGTYVY-VVADNKAQVRDLTL- 328

Query: 351 GEVGDSHVMVGSGLKAGDRVVTEGQFRLKPGSKVNALKPGEVPA-APTAAELEKAKQNAK 409
           G       +V  GL +G+ VV EG  RL+ G  VN ++  E+PA +P A +   A   A+
Sbjct: 329 GPASGGRTVVLKGLVSGEPVVLEGLDRLENGRAVNVVQAAELPASSPLAPDAAPAAATAR 388