Pairwise Alignments

Query, 433 a.a., TolC family outer membrane protein from Rhodanobacter sp000427505 FW510-R12

Subject, 479 a.a., channel protein TolC from Pseudomonas simiae WCS417

 Score =  250 bits (639), Expect = 6e-71
 Identities = 162/450 (36%), Positives = 248/450 (55%), Gaps = 19/450 (4%)

Query: 3   LKLLTLALAL---------AAVSLPGHSEDLLDAYRDARANDPVLSQADATRLATAEGVD 53
           L+ L+LALA+         AA +    + DL+  Y++A  N+  L+ A A   A  E V 
Sbjct: 2   LRKLSLALAVSCATNGMVWAAEAPLSANTDLVSVYQEAVDNNADLAAARAQYGAQKEVVP 61

Query: 54  QARALLLPQIGASMSLN----QINGGNQIGHSRTRSINGTLSQTVLDFSKYANLKAAHSA 109
           QARA LLP +     +N    QI+      +    S   TLSQ +    ++  L+AA + 
Sbjct: 62  QARAGLLPNLTGGADINNVRTQIDTPAATANRDAHSWRATLSQPLFRADRWFQLQAAEAT 121

Query: 110 SDAQDELYQAAAQELYGRVAAAYFGVLTSEDELTFAKANEDAFRQQYEQSDQRFKVGLSA 169
           ++       A  Q L  + A  YF VL ++D L   KA E+AF++Q +QS++RF VGLS 
Sbjct: 122 NEQAALQLSATEQNLILQSAENYFAVLRAQDNLASTKAEENAFKRQLDQSNERFDVGLSD 181

Query: 170 ITDVYQAKAYYEAAKSQTIATQNTLNDAREALTQVTGKPTGELKKLRDDLPMQPPTPADQ 229
            TDV Q++A Y+ A++  I  Q  + DA EAL  +T +    ++ +   LP+ PP P D 
Sbjct: 182 KTDVLQSQASYDTARANRILAQRQVEDAFEALITLTNRQYNSIQGIVHTLPVLPPLPNDA 241

Query: 230 DSWVKQALETNPNLLTQKYNVQTAQHNISAARAGHLPTITAGVSYGKG----AGWSDSNA 285
            +WV+ A   N NLL   Y V  A+  +   +AGH PT+ A   Y KG     G+S+ NA
Sbjct: 242 KAWVETAGRQNLNLLASNYAVTAAEETLKQRKAGHAPTLDAVAQYEKGDNDALGFSNPNA 301

Query: 286 -GARYR-DPSSTTIGLTLNVPIFSGGFTQSRVRQSIYQRDAATDALEAQRRQVVRDTLNY 343
            G  YR D    TIGL L++PI+SGG T S+VR+S  +        E  RRQVV +T N 
Sbjct: 302 FGTPYRGDVEQRTIGLRLSIPIYSGGLTSSQVRESYSRLGQTEQQREGLRRQVVENTRNL 361

Query: 344 YRSVIAGIAQVESAKASVESGRKALEATRAGFEVGTQTMTNVLLAIQVLTSSESSYSQAR 403
           +R+V   + QV++ + S+ S + A+EAT  G++VGT+ + +VL + + L +S  +Y+ +R
Sbjct: 362 HRAVNTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNIVDVLDSQRQLYASVRNYNNSR 421

Query: 404 HQFILNKLLLRQTAGTAELKDIEEINALLQ 433
           + +IL+ L L+Q AGT    D++++   L+
Sbjct: 422 YDYILDNLRLKQAAGTLNPGDLQDLARYLK 451