Pairwise Alignments

Query, 433 a.a., TolC family outer membrane protein from Rhodanobacter sp000427505 FW510-R12

Subject, 493 a.a., outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) from Escherichia coli BW25113

 Score =  226 bits (576), Expect = 1e-63
 Identities = 141/441 (31%), Positives = 240/441 (54%), Gaps = 12/441 (2%)

Query: 2   RLKLLTLALALAAVSLPGHSEDLLDAYRDARANDPVLSQADATRLATAEGVDQARALLLP 61
           +L  + + L+L+  S    +E+L+  Y+ AR ++P L ++ A R A  E +++AR+ LLP
Sbjct: 3   KLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLP 62

Query: 62  QIGASMSLNQINGGNQIG--HSRTRSINGTLSQTVLDFSKYANLKAAHSASDAQDELYQA 119
           Q+G        NG       +S   S +  L+Q++ D SK+  L     A+  QD  YQ 
Sbjct: 63  QLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTYQT 122

Query: 120 AAQELYGRVAAAYFGVLTSEDELTFAKANEDAFRQQYEQSDQRFKVGLSAITDVYQAKAY 179
             Q L    A AYF VL + D L++ +A ++A  +Q +Q+ QRF VGL AITDV  A+A 
Sbjct: 123 DQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQ 182

Query: 180 YEAAKSQTIATQNTLNDAREALTQVTGKPTGELKKLR-DDLPMQPPTPADQDSWVKQALE 238
           Y+   +  +  +N L++A E L Q+TG    EL  L  ++     P P   ++ +K+A +
Sbjct: 183 YDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPV--NALLKEAEK 240

Query: 239 TNPNLLTQKYNVQTAQHNISAARAGHLPTITAGVSYG-KGAGWSDSN----AGARYRDPS 293
            N +LL  + +   A+  I  A+ GHLPT+    S G     +S S     AG +Y D +
Sbjct: 241 RNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSN 300

Query: 294 --STTIGLTLNVPIFSGGFTQSRVRQSIYQRDAATDALEAQRRQVVRDTLNYYRSVIAGI 351
                +GL+ ++PI+ GG   S+V+Q+ Y    A++ LE+  R VV+   + + ++ A I
Sbjct: 301 MGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASI 360

Query: 352 AQVESAKASVESGRKALEATRAGFEVGTQTMTNVLLAIQVLTSSESSYSQARHQFILNKL 411
           + + + K +V S + +L+A  AG+ VGT+T+ +VL A   L +++   + AR+ +++N+L
Sbjct: 361 SSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQL 420

Query: 412 LLRQTAGTAELKDIEEINALL 432
            ++   GT   +D+  +N  L
Sbjct: 421 NIKSALGTLNEQDLLALNNAL 441