Pairwise Alignments

Query, 433 a.a., TolC family outer membrane protein from Rhodanobacter sp000427505 FW510-R12

Subject, 488 a.a., outer membrane channel protein TolC from Erwinia tracheiphila SCR3

 Score =  232 bits (592), Expect = 2e-65
 Identities = 143/443 (32%), Positives = 242/443 (54%), Gaps = 18/443 (4%)

Query: 2   RLKLLTLALALAAVSLPGHSEDLLDAYRDARANDPVLSQADATRLATAEGVDQARALLLP 61
           +L  L + L+L  +S    +E+LL  Y+ AR ++P L  + A R A  E +++AR+ LLP
Sbjct: 3   KLLPLLIGLSLGGLSAASQAENLLQIYQQARLSNPDLRSSAADRDAAFEKINEARSPLLP 62

Query: 62  QIGASMSLNQINGGNQIG--HSRTRSINGTLSQTVLDFSKYANLKAAHSASDAQDELYQA 119
           Q+G        NG    G  HS T S +  L+QT+ D SK+  L      +  QD  YQ 
Sbjct: 63  QLGLGADYTYNNGYRDSGGLHSNTTSGSLQLTQTIFDMSKWRTLTLQEKIASIQDVTYQT 122

Query: 120 AAQELYGRVAAAYFGVLTSEDELTFAKANEDAFRQQYEQSDQRFKVGLSAITDVYQAKAY 179
           A Q L    A AYF VL + D L++ +A + +  +Q +Q+ QRF VGL AITDV  A++ 
Sbjct: 123 AQQTLILNTATAYFNVLNAIDTLSYTEAQKQSIYRQLDQTAQRFNVGLVAITDVQNARSQ 182

Query: 180 YEAAKSQTIATQNTLNDAREALTQVTGKPTGELKKLR-DDLPMQPPTPADQDSWVKQALE 238
           Y++  +  +  +N L++  E L QV G     L  L  D    + P P   ++ +K+A  
Sbjct: 183 YDSVLASEVTARNNLDNNLETLRQVAGNYYLTLASLNVDSFKTEKPQPV--NALLKEAES 240

Query: 239 TNPNLLTQKYNVQTAQHNISAARAGHLPTITAGVSYGKGAGWSDSNAGARYRDPSSTT-- 296
            N +LL+ + N   A+  I +A  GH+PT+    S     G S+S  G R  + SS++  
Sbjct: 241 RNLSLLSARLNQDLAREQIRSAETGHMPTLDLTAS----TGLSNSKYGGRRANQSSSSTD 296

Query: 297 -------IGLTLNVPIFSGGFTQSRVRQSIYQRDAATDALEAQRRQVVRDTLNYYRSVIA 349
                  +GL+ ++P+++GG   S+V+Q+ Y   AA++ LE+  R  V+   + + +V A
Sbjct: 297 SIAGSNQVGLSFSLPLYAGGAVTSQVKQAQYAYVAASEQLESAHRAAVQTVRSSFNNVNA 356

Query: 350 GIAQVESAKASVESGRKALEATRAGFEVGTQTMTNVLLAIQVLTSSESSYSQARHQFILN 409
            ++ + + K +V S + +L+A  AG++VGT+T+ +VL A   L +++   + AR+ +++N
Sbjct: 357 SVSSINAYKQAVVSAQSSLDAMEAGYQVGTRTIVDVLDATSTLYNAKQQLADARYSYMIN 416

Query: 410 KLLLRQTAGTAELKDIEEINALL 432
           +L ++   GT   +D+  +N+ L
Sbjct: 417 ELNIKSALGTLNEQDLLALNSRL 439