Pairwise Alignments

Query, 818 a.a., DEAD/DEAH box helicase family protein from Rhodanobacter sp000427505 FW510-R12

Subject, 787 a.a., Type I restriction enzyme EcoAI R protein from Pseudomonas putida KT2440

 Score =  977 bits (2525), Expect = 0.0
 Identities = 483/814 (59%), Positives = 617/814 (75%), Gaps = 40/814 (4%)

Query: 7   LSERDVCTKFITPALVAAGWDVQTQIREEVGFTKGRIIVRGRLVTRGKAKRADYVLYYK- 65
           LSERD+C+K+I PA+  AGWD+  Q+REEV FTKGRI+VRG+L +RG+A+RAD++LY++ 
Sbjct: 6   LSERDICSKYIAPAIQHAGWDMHKQVREEVSFTKGRIMVRGKLHSRGEARRADFILYHQA 65

Query: 66  HLPLALIEAKDQTHAAGDGMQQALGYATTLDIPYVFSSNGKGFQFHDRSGVSVPLEQSLS 125
           +LP+A+IEAKD  H+ G GMQQALGYA  LD+P+VFSSNG GF FHDRSG    +E  LS
Sbjct: 66  NLPIAVIEAKDNKHSVGSGMQQALGYAEALDVPFVFSSNGDGFLFHDRSGTDSKVETELS 125

Query: 126 MDEFPSPNELWSRYRSWKGLQPAQESTVLQAYYEDGSGKEPRYYQRNAINAAVEAIAKGQ 185
           +D+FPSP ELW RY  WKGL  A +  +   YY+DGSG+ PRYYQ NAIN  VEA+A+GQ
Sbjct: 126 LDQFPSPAELWHRYCQWKGLDNAVQHKIEAPYYDDGSGRMPRYYQMNAINRTVEAVARGQ 185

Query: 186 NRILLVMATGTGKTYTAFQIIWRLWKAGQKKRILFLADRNVLVDQTMVNDFRPFGPAMAK 245
           +R+LLVMATGTGKTYTAFQIIWRLWK+ QKKRILFLADRN+LVDQT  NDF+PFG AM K
Sbjct: 186 DRVLLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNILVDQTKNNDFKPFGQAMTK 245

Query: 246 LSTASKTIERADGTEIELTLALDKRRRIDPAYEIYLGLYQAITGPEERQKLFREFSPDFF 305
           ++                      RR+ID +YEIYL LYQA+TG EE   ++++FS DFF
Sbjct: 246 IA----------------------RRQIDTSYEIYLSLYQAVTGAEEEMNVYKQFSRDFF 283

Query: 306 DLIVIDECHRGSAAEDSAWREILEYFSSATQIGLTATPKETEYVSNIHYFGEPVYTYSLK 365
           DLIVIDECHRGSAAEDSAWREIL YFS+AT +GLTATPKET+ VS+I YFGEPVY+Y+LK
Sbjct: 284 DLIVIDECHRGSAAEDSAWREILGYFSNATHVGLTATPKETKEVSSITYFGEPVYSYTLK 343

Query: 366 QGISDGFLAPYKVIKVHLDVDVQGYRPKSGETDKHGYLIDDRLYNEKDFDRTLVIDERTQ 425
           QGI DGFLAPYKV+++  D D+QG+RP  G  DK+G LI+DR+YN KD DRTLVI+ RTQ
Sbjct: 344 QGIEDGFLAPYKVVRIDFDKDLQGWRPPKGMLDKNGELIEDRIYNLKDMDRTLVIETRTQ 403

Query: 426 RVAKWISDYLKQSGDRFQKTIVFCVDTEHAARMRQALINENADLVQQNARYVMRITGDDN 485
            VA+ ++++LK S D FQKTIVFC D  HA RMRQAL+N N + V +N +YVMRITGDD 
Sbjct: 404 LVAQKVTEFLKAS-DPFQKTIVFCDDINHAERMRQALVNLNPERVAENRKYVMRITGDDQ 462

Query: 486 EGTAQLGNFIDPESPYPVIVTTSRLLSTGVDAQTCRLIVLDREVGSMTEFKQIVGRGTRV 545
           EG A+L NFI+PE  YPVI TTS+L++TGVDAQTC+LIVLD+ + SMTEFKQI+GRGTR+
Sbjct: 463 EGKAELDNFINPEERYPVIATTSKLMTTGVDAQTCKLIVLDQHIKSMTEFKQIIGRGTRI 522

Query: 546 HEDTHKYYFTLVDFRKATNHFADPDFDGEPVQIYQPDEYDSPVPPEDVPLDEEGNPLPSQ 605
           +ED  KY+FT++DF+KAT  FADP FDG+PV +Y P+  + PVPP+D+    EG+ + + 
Sbjct: 523 NEDFGKYWFTIMDFKKATELFADPAFDGDPVVVYAPEGNELPVPPDDL---LEGDGISAG 579

Query: 606 PTGEETIVDQPPPAIPPPGVDDDQPR-KFYVKQRPVTVVLERVEYLDESGKLVTESLRDY 664
             GE   +D         G +D +   K+ +   P+ V+ ERV+Y    G+L+TESL DY
Sbjct: 580 SDGESDDLDF-------TGEEDGKKLIKYVIDSIPIYVIAERVQYYGPDGRLITESLHDY 632

Query: 665 SRNAIRRHFTSLDAFLRRWREAERKESVIAELAEEGLLLEPLQEEV----GKDLDPFDLI 720
           +R  +++ F SLD FLR W +AE+K+ +I E+A +G++ E L EEV    GK LDPFDLI
Sbjct: 633 TRTCVQKQFASLDDFLRHWSDAEQKKVIIDEMAAQGVMWEALAEEVEKKQGKPLDPFDLI 692

Query: 721 CHIAFDQPPLSRRERADSVTKRDVFTKYGPQACAVLEALLAKYRDEGVVTDLDNVRVLEI 780
           CH+AFDQPPLSR+ERA+ V KR+ F KY   A  VLEALL KY D G +  ++++++L++
Sbjct: 693 CHVAFDQPPLSRKERAEQVKKRNYFAKYSGAARQVLEALLDKYADTG-IEHIEDIKILQL 751

Query: 781 PPFNAMGTPIQLIKPFGSKAGFENAVHELQNALY 814
            PFN +G PI+L+K FG KAG+  A+HEL++ALY
Sbjct: 752 DPFNQLGAPIELVKAFGGKAGYNKAIHELEDALY 785