Pairwise Alignments

Query, 483 a.a., efflux transporter outer membrane subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 490 a.a., Outer membrane factor (OMF) lipoprotein associated wth EmrAB-OMF efflux system from Variovorax sp. SCN45

 Score =  292 bits (747), Expect = 2e-83
 Identities = 180/481 (37%), Positives = 267/481 (55%), Gaps = 17/481 (3%)

Query: 6   LAAAAALTLALAACASSGGLHPEGTPTDPSTLKAGRSLAQLSAAAWPT---TDWWTGLGD 62
           + AAA L +ALA CA   G+  +    D S+L     +A  SAAA  +   + WW   GD
Sbjct: 15  VVAAALLVVALAGCADMAGIGSQAKLRDASSL----GIAPDSAAAPVSRLDSQWWLAFGD 70

Query: 63  RQLDALIAEALQDNPGLGVADARARAAQAAAGFADAARGPSVNGGAAVAGAR------PP 116
            QL++LI +A+  NP L VA AR   AQA+A  A AA  P VNG   +   +       P
Sbjct: 71  PQLNSLIDQAVAGNPNLQVAQARLVRAQASADVAGAALKPKVNGELDLNRQKFNSNYIYP 130

Query: 117 PALLGDKAHFAIAKYGYTSFKWDLDPWGGKRAAWEAALGQARAAEVDARAARIELSGNVA 176
             L G   +  + + G +   W+LD +G  R+A + A+G A AA  DA AAR+ L+ NVA
Sbjct: 131 APLGGSIQNIGLLQLGAS---WELDFFGKNRSALDTAIGAANAAAADADAARVLLASNVA 187

Query: 177 RAYVQLGYAFTQQDLADAELQRAGSARELTRQRVAAGIDNQVALKQGDAEVASAEQQAAL 236
           R+Y Q      Q  +A   L +     +L R RV+AG+D ++ L+Q +  +  A QQ   
Sbjct: 188 RSYFQWARLNDQLTVAKRTLAQRDETLKLVRDRVSAGLDTRLELRQSEGGLPEARQQIES 247

Query: 237 ARRAVDAARSSLAVLLGKGPDRGLQLERPRQLAPAALAVPAKLPLELVGHRADLVAARWR 296
               +   + +L  L+ + P+    L+ P       +A+   +P +L+G RAD+ AARWR
Sbjct: 248 LNEQIALQQHALDALVAQ-PNVSQSLKPPLLGEVKPIALQTNIPADLLGRRADIAAARWR 306

Query: 297 VEAAGKDIRAAKTEFLPDISIGAMAGLVSLGGANPLSLAGRFYQVGPSLSLPIFDGGRLR 356
           VEAA  D+  AKT F P++++ A AG  +LG    L      + VGP++SLPIF+GG+LR
Sbjct: 307 VEAATSDVANAKTLFYPNVNLTAFAGFQALGFGKLLKSGSEQWGVGPAISLPIFEGGKLR 366

Query: 357 ANLSAKDAQYDLAVAQYNQTLVGALNQVADELSALKSLQTQIAAQQRAQDAAQQAWDLAE 416
           ANL  K A  D+A+  YN T++ A+   AD++++ +S+  Q   Q+ AQ AA+ A+D+A 
Sbjct: 367 ANLRGKSADLDVAIESYNATVIDAVRDAADQVTSAQSIARQQTEQRAAQTAAEGAYDIAV 426

Query: 417 QRYQAGVGSYLEALSVRQQLLAVERGSAALEAQQADLSVQLIQALGGGYQPRTDAAVAIP 476
           QRY+AG+G+YL  L+    +LA  R +  L A+  D  V L +ALGGG+QP      + P
Sbjct: 427 QRYRAGLGNYLNVLTAETSVLAQRRLAVDLAARALDTQVALARALGGGWQPPATTTASAP 486

Query: 477 S 477
           +
Sbjct: 487 A 487