Pairwise Alignments

Query, 483 a.a., efflux transporter outer membrane subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

 Score =  176 bits (447), Expect = 1e-48
 Identities = 135/470 (28%), Positives = 215/470 (45%), Gaps = 14/470 (2%)

Query: 5   QLAAAAALTLALAACASSGGLHPEGTPTDPSTLKAGRSLAQLSAA-AWPTTDWWTGLGDR 63
           +L  A      L+AC  S   H     +  +  K      Q S + A     WW   GD 
Sbjct: 22  RLLGAGLCVALLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIYGDA 81

Query: 64  QLDALIAEALQDNPGLGVADARARAAQAAAGFADAARGPSVN-----GGAAVAGARPPPA 118
            L+AL+ E  + N  +  ++A+ R AQA    + AA  PS++       +A        +
Sbjct: 82  GLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSS 141

Query: 119 LLGDKAHFAIAKYGYTSFKWDLDPWGGKRAAWEAALGQARAAEVDARAARIELSGNVARA 178
           L  + +             W++D WG  R    A    A A+  D  + R+     + + 
Sbjct: 142 LSNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQN 201

Query: 179 YVQLGYAFTQQDLADAELQRAGSARELTRQRVAAGIDNQVALKQGDAEVASAEQQAALAR 238
           Y+QL     Q+ L +A +     +  +   +  AG+    A+ Q   ++ S   QA L  
Sbjct: 202 YLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKST--QADLID 259

Query: 239 RAVDAAR--SSLAVLLGKGP-DRGLQLERPRQLAPAALAVPAKLPLELVGHRADLVAARW 295
                A+  +++AVLLGK P D  L      +  PA   +P  LP +L+  R D+ AA  
Sbjct: 260 LIWQRAQFENAIAVLLGKAPADFALA---DSKAIPALPQIPVSLPSQLLERRPDIAAAER 316

Query: 296 RVEAAGKDIRAAKTEFLPDISIGAMAGLVSLGGANPLSLAGRFYQVGPSLSLPIFDGGRL 355
            V AA  +I  ++  + PD+S+    G  S   +N + L  R++ VGP L+L +FD G+ 
Sbjct: 317 NVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKR 376

Query: 356 RANLSAKDAQYDLAVAQYNQTLVGALNQVADELSALKSLQTQIAAQQRAQDAAQQAWDLA 415
            A +    A YD  VAQY QT++    +V + L  LK    +   +Q A DAA+++  L 
Sbjct: 377 SAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLT 436

Query: 416 EQRYQAGVGSYLEALSVRQQLLAVERGSAALEAQQADLSVQLIQALGGGY 465
           E +Y+AG+  YL+ ++V+   L+ ER    L   +   SVQL+ ALGGG+
Sbjct: 437 ENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGW 486