Pairwise Alignments

Query, 483 a.a., efflux transporter outer membrane subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 485 a.a., RND efflux system, outer membrane lipoprotein CmeC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  161 bits (407), Expect = 5e-44
 Identities = 136/466 (29%), Positives = 208/466 (44%), Gaps = 10/466 (2%)

Query: 8   AAAALTLALAACASSGGLHPEGTPTDPSTLKAGRSLAQLSAAAWPTTDWWTGLGDRQLDA 67
           A  A    LA C  +       +PT      A  +++    AA     W     D  L  
Sbjct: 15  ATLAFVTTLAGCTMAPKHERPASPTAMVYPYATSTVSGAPDAA--DIGWRDFFHDPLLQE 72

Query: 68  LIAEALQDNPGLGVADARARAAQAAAGFADAARGPSVNGGAAVAGARPPPALLGDKAHFA 127
           LIA AL++N  L  A     AA+A      A   P++    A+  +R P  L        
Sbjct: 73  LIAIALRNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMDASRTPADLSVMDESEI 132

Query: 128 IAKY---GYTSFKWDLDPWGGKRAAWEAALGQARAAEVDARAARIELSGNVARAYVQLGY 184
             +Y   G T+  W+LD WG  R+  + AL    A +    AAR+ L   VA A++ L  
Sbjct: 133 NRRYEAAGATT-AWELDLWGRVRSLSDQALAAYMALDETYIAARMSLVSEVASAWLTLRA 191

Query: 185 AFTQQDLADAELQRAGSARELTRQRVAAGIDNQVALKQGDAEVASAEQQAALARRAVDAA 244
                 L +  L    S+  LT Q    G   Q+ L+  +  + SAE   A   R +   
Sbjct: 192 DRELLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRSAEINRAAYTRQLARD 251

Query: 245 RSSLAVLLGKG--PDRGLQLERPRQLAPAAL--AVPAKLPLELVGHRADLVAARWRVEAA 300
           R++L +LLG+   P+   +L     L   A+   +P  LP +L+  R D+ AA +R+  A
Sbjct: 252 RNALELLLGQPLTPELSRRLNEAVTLTEGAIPTTLPGGLPSDLLVRRPDIRAAEYRLRGA 311

Query: 301 GKDIRAAKTEFLPDISIGAMAGLVSLGGANPLSLAGRFYQVGPSLSLPIFDGGRLRANLS 360
              I AA+  F P IS+   AG  S   +         ++  P ++LP+F GG LRA+L 
Sbjct: 312 NARIGAARAAFFPTISLTGSAGTASASLSGLFEPGSGSWRFLPQITLPLFHGGALRADLD 371

Query: 361 AKDAQYDLAVAQYNQTLVGALNQVADELSALKSLQTQIAAQQRAQDAAQQAWDLAEQRYQ 420
               Q  + +A+Y   +  A   VAD L+  ++L  Q+ ++QRA +A+Q A++LA  R+Q
Sbjct: 372 RAHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAVEASQIAYELAGLRFQ 431

Query: 421 AGVGSYLEALSVRQQLLAVERGSAALEAQQADLSVQLIQALGGGYQ 466
            GV  YL  L   + L   ++        Q    + L +ALGGG++
Sbjct: 432 EGVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGWR 477