Pairwise Alignments

Query, 588 a.a., ABC transporter ATP-binding protein/permease from Rhodanobacter sp000427505 FW510-R12

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  107 bits (267), Expect = 1e-27
 Identities = 122/466 (26%), Positives = 205/466 (43%), Gaps = 37/466 (7%)

Query: 112 LRRAAHARLIEAPLSSLADATSAEIANVLTHNVELIVQGFS-ALQQLLIAGVSAAVSLGF 170
           LR A   +L+  P     +  S  + + +T NV ++    + A++ ++  G++      +
Sbjct: 115 LRVALFNKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAY 174

Query: 171 AFWVSPPLMLAA----PVLMGLGLLASRAYGREQSLVARQYVVDMTRLFWHSEDFPRRLR 226
             W++  L L      PV+  +  +AS+ + R+QS   +  + D+T +   + +  +  R
Sbjct: 175 LLWMNWHLTLVMVAILPVIAVMVSIASKKF-RKQSKKIQVAMGDVTHV---ASETIQGYR 230

Query: 227 HVRSFEREAAEQASYGAISGRLCHGYRRQLELVASGRL---LLELLAAAGIAALFVLAHR 283
            VRSF  EA EQ  +G  S        +QL +  +G L   +L+L+  + +AAL  L   
Sbjct: 231 VVRSFGGEAYEQQRFGQASQS---NTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLVLF 287

Query: 284 WHGVEQAELIAVCLLLGRLLP----YLVTTRQSFQQ-LRSAAPAFELWQRYMNLEPVYAS 338
             G   A  +   +    LLP     L     + Q+ L  A   FE        E     
Sbjct: 288 LRGDSTAGDLVAYITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLD-----EAPEVD 342

Query: 339 AASPQADASGAALHIERMRLTPPPGGLEIGG---LVLRPGELTLVCGDSGIGKSSLVDVL 395
             + + +     L +  +  T P    E+      V  PG++  + G SG GKS+L  ++
Sbjct: 343 TGTVEKERVEGRLEVRNLSFTYPGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAALI 402

Query: 396 AGMMTPEVFVAHRDGRPIDFGAYRELVRHGAYVSQDVRPWQHSVRECLRWA----APDAT 451
                 +      DG  I+    R L RH + V+Q V  +  +V   + +     AP A 
Sbjct: 403 PRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRAD 462

Query: 452 -DAMLCDALADVGLDKRLAEAPQGLDTELRGASSRLSGGELQRLLLAQVILRQPFLAVLD 510
            +A   DA A   +D+     P+G DTE+      LSGG+ QRL +A+ +L+   L +LD
Sbjct: 463 IEAAAADAYAKEFVDR----LPKGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILD 518

Query: 511 EATSALDAASETAVLATIRRRLPQTILVVVSHRPGVAAIADRYLTI 556
           EATSALD  SE  + A +   +     +V++HR      AD+ L +
Sbjct: 519 EATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQILVM 564