Pairwise Alignments

Query, 398 a.a., LSU m5C1962 methyltransferase RlmI from Pseudomonas fluorescens GW456-L13

Subject, 393 a.a., class I SAM-dependent rRNA methyltransferase from Fusobacterium nucleatum SB010

 Score =  193 bits (491), Expect = 6e-54
 Identities = 122/391 (31%), Positives = 204/391 (52%), Gaps = 10/391 (2%)

Query: 8   LKANADRRLRNGHLWVYSNEI-DVAATPLHGFKAGDQAILEAAGGKPLGIVAMSPNNLIC 66
           +K   ++++ N +  VY +EI D+    +   K GD   +     K L    ++      
Sbjct: 6   IKKEKEQKILNFYPNVYKDEIKDI----IGNVKTGDIVDVITNDMKFLARGYVTEGTSAF 61

Query: 67  ARLLS-RDIKLPLDKSLLVHRLNVALSLRERLFDKP-FYRLVYGDSDLLPGLVVDRFGDI 124
            R+L+ +D K+  D+  +  R+  A   R+ L D+    R  Y ++D +PGL++D+F   
Sbjct: 62  VRILTTKDEKI--DRKFIFKRIKNAYEKRKHLLDETNSVRAFYSEADFIPGLIIDKFDKY 119

Query: 125 LVVQIASATMEAHKDDVIAALTQVLKPSGILFKNDSAARDAEGLNRYVETVFGLVPEWVA 184
           + +Q  ++ +E  K D+I A+ + LKP GI  ++D   R  EG+      +FG +PE   
Sbjct: 120 VSIQFRNSGVEVFKQDIIEAVKKYLKPKGIYERSDVENRIIEGVETKTGMIFGEIPERTI 179

Query: 185 LEENGVKFEAPVIQGQKTGWFYDHRMNRARLAPYAKGK-RVLDLYSYIGGWGVQAAAFGA 243
           + +NGVK+   ++ GQKTG+F D R +R  +A Y   + R LD++S  GG+ + A   GA
Sbjct: 180 MVDNGVKYNIDIVDGQKTGFFLDQRDSRKFIAKYINNQTRFLDVFSSSGGFSMCALKNGA 239

Query: 244 SEVFCVDASAFALDGVERNAALNGFAEKMTCIEGDVFEALKELKASEERFDVIVADPPAF 303
            EV  +D  + AL+    N  LN F    + IEGD F  L  L    ++FD+I  DPP+ 
Sbjct: 240 KEVIAIDKDSHALELCYENYKLNEFTADFSTIEGDAFLMLNSLATRNKKFDIITLDPPSL 299

Query: 304 IKRKKDMKNGEGAYRRLNEQAMRLLTKDGILVSASCSMHLPEDDLQNILLTSARHLDRNI 363
           IKRK ++  G   +  L +++ +LL   GIL   +C+ H+   DL  +   SA   ++ +
Sbjct: 300 IKRKTEIYKGRDFFLDLCDKSFKLLENGGILGVITCAYHISLQDLIEVTRMSASKNNKLL 359

Query: 364 QMLERGGQGPDHPVHPAIPETRYIKSITCRL 394
            ++    Q  DHP    IPET Y+K++  ++
Sbjct: 360 SVVGINYQPEDHPWILHIPETLYLKALWVKI 390