Pairwise Alignments

Query, 718 a.a., Type I secretion system ATPase, LssB family LapB from Pseudomonas fluorescens GW456-L13

Subject, 757 a.a., type I secretion system permease/ATPase from Rhizobium sp. OAE497

 Score =  349 bits (895), Expect = e-100
 Identities = 198/669 (29%), Positives = 364/669 (54%), Gaps = 4/669 (0%)

Query: 46  LPLPEQRLS-VELLPRAAARAGLQGRVLQRKLEDIPAIAMPALLLLRDGRSAVLLGWQGE 104
           LP+ ++  S +  + + A R GL  + ++  +  I    +P LL L+ G   ++   + +
Sbjct: 57  LPIMQETASPLRRIEKLARRFGLDVKPVEPVVSGITGRRLPLLLELKGGAVGLITEIR-D 115

Query: 105 DQVRVLLSESDGGESLVSRDLLADDYTGKVFFAQPQHKFDVNHGTLI-PRARSWFRDTLK 163
            + ++  +E +G  + +    L D     +     + + D      I P    WFR    
Sbjct: 116 GEAKITFAEDNGQWTWIETSYLQDGIAHLLIARDARTRTDERVDAYIAPDTHGWFRKLAL 175

Query: 164 RSRWLYADAIAASFLINIIAMAAPLFVMNVYDRVVPNQAEATLWVLALGITGAYLFDLIL 223
                Y   + AS + N +++   +F M VYDRVVP  + +TL VL +G+  A +FD I+
Sbjct: 176 NDLRPYGYVLLASLIANALSVTGVIFSMQVYDRVVPANSMSTLVVLFIGVMLAVVFDFIM 235

Query: 224 KSLRSLCLDLAGKKTDLIISATLFERIVGMAMKYRPARVGSFAQNIHEFQSLRDFLASLT 283
           + +R+L +D+ GK+ D+ IS  +F   + +  + RP   G+F   + + + +RD   S T
Sbjct: 236 RKVRTLIIDVLGKRADIKISDVVFGHALRVRNQNRPKATGTFIAQLRDLEQVRDLFTSTT 295

Query: 284 LTSLIDLPFTILIFIVIAILGGHLVWIPVLAFPIALAIGYALQKPLVATMERTMALGAER 343
           + ++ DLPF  L   ++A++GG L  IP +A  + +A G   Q+ L A   + M   + R
Sbjct: 296 VAAIADLPFFFLFLALMALIGGWLAVIPAVALLLMIAPGLLAQRRLRACAGQAMREASLR 355

Query: 344 QSSLIETLAGLDAVKVNNAESERQYQWEQTIGTLSRLELRVKMLSGLAMNITLLIQQLAG 403
            + L+E + G++ +K   AES  Q +W       +  ++R++ ++ +       IQ    
Sbjct: 356 NAMLVEAVQGIEDIKALQAESVFQEKWNTFNTASADAQVRLRYITSILTGWGHSIQTSVF 415

Query: 404 VIMIVFGVYQIIDGHLSMGGLIACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMME 463
            +++  G   ++ G +S G L+AC +L  R ++P+A L+ +L+R+Q A++ + S++ +M+
Sbjct: 416 AVIVFCGAPIVMKGDMSTGSLVACSILGSRMMAPMAQLTQVLSRFQHAKLGLQSLNTIMK 475

Query: 464 LPQERNFEERPLSRKVLQGGIECRQLNFTYPQQQNL-ALKNINLSISPGEKVGIIGRSGS 522
           +P +    E  LS   L G  +     + Y Q     AL    L I  GE + ++G++G+
Sbjct: 476 MPVDHPPAETRLSVGSLLGQYQLSNTLYYYGQPVGKPALSVAELKIDAGETIALLGKNGA 535

Query: 523 GKSSLAKLLVGLYQPDDGALLVDGVDIRQIDVSELRYNIGYVPQDIQLLAGTLRDNLVSG 582
           GKS+L + L G  +P  G +L+D + + QID ++LR  +G + Q+ +L  GT+R+N++ G
Sbjct: 536 GKSTLLQALSGQIEPASGEVLIDNLAMEQIDPNDLRREVGLLTQNSRLFHGTIRENILLG 595

Query: 583 ARYVEDELVLQAAELAGVHEYARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPI 642
           A+    + +L A ++ G  ++ R+ P+G +  + E G+ LSGGQ+Q + L+R L+ NP +
Sbjct: 596 AQSASQQALLDALQMTGADDFIRMMPKGLDHLIDEGGRGLSGGQQQALLLSRLLIRNPSV 655

Query: 643 LLLDEPTSAMDNTGEERLKQRLAAVIENKTMVLVTHRASLLSLVDRLIVVDRGQILADGP 702
           +LLDEPT++MD   E    +R +A    KT+V+ THR  +L L++R++ +D+G+I+ D P
Sbjct: 656 VLLDEPTASMDEATERLFIRRFSAWCRGKTVVIATHRMRVLDLIERVVALDQGRIVLDAP 715

Query: 703 KAAVMEALK 711
           K   + AL+
Sbjct: 716 KEQALRALR 724