Pairwise Alignments

Query, 718 a.a., Type I secretion system ATPase, LssB family LapB from Pseudomonas fluorescens GW456-L13

Subject, 731 a.a., type I secretion system permease/ATPase from Rhizobium sp. OAE497

 Score =  441 bits (1134), Expect = e-128
 Identities = 251/700 (35%), Positives = 407/700 (58%), Gaps = 12/700 (1%)

Query: 28  ALCMLHQKPASAAMLTTGLPLP-EQRLSVELLPRAAARAGLQGRVLQRKLEDIPA--IAM 84
           ++   + +P+S  +L +GLP    + L V+ + R A R GLQ  V++ +  D        
Sbjct: 23  SVAAFYGRPSSDTVLFSGLPDEITESLEVDDVERMAERIGLQ--VIKHEERDCRTGNFDC 80

Query: 85  PALLLLRDGRSAVLLGWQGEDQVRVLLSESDGGESLVSRDLLA-----DDYTGKVFFAQP 139
           PA++   DG    LL    +      +    G    ++R  LA       +   +++   
Sbjct: 81  PAIVAFADGGVLPLLEIAEDGSYVTDIVAIPGAPIRITRQELAALKPHTAFAFTLYYQNA 140

Query: 140 QHKFDVNHGTLIPRARSWFRDTLKRSRWLYADAIAASFLINIIAMAAPLFVMNVYDRVVP 199
             +  V +   I + R W   TL      Y   + A+  IN+IA+ +PLF MNVYDRV+P
Sbjct: 141 SEEALVGNAVEIEK-RHWLATTLAPYWRTYVRVMVAALFINLIALGSPLFTMNVYDRVLP 199

Query: 200 NQAEATLWVLALGITGAYLFDLILKSLRSLCLDLAGKKTDLIISATLFERIVGMAMKYRP 259
           N+A  TLWVL+ GI+ AYLFD +LK+ RS  +D AG+K DL +S  +F++++   +  RP
Sbjct: 200 NKAIPTLWVLSAGISLAYLFDFLLKTARSSLIDYAGRKADLRLSQMIFDKVLNSTLASRP 259

Query: 260 ARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTILIFIVIAILGGHLVWIPVLAFPIAL 319
              G +A  + +++ +R+F  S T+  LID  F  +   VI ++ G LV IP +A   ++
Sbjct: 260 MSTGEYANRVTQYEFVREFFTSNTIGVLIDSLFVFIFLFVIYLISGWLVVIPAVALVASV 319

Query: 320 AIGYALQKPLVATMERTMALGAERQSSLIETLAGLDAVKVNNAESERQYQWEQTIGTLSR 379
           AIG   Q  +   M       + RQS L+ET++ ++ +K   AE+    +W++     SR
Sbjct: 320 AIGLWAQAAIGKRMATAANEASRRQSLLVETISTIETLKSLRAEATMLRRWQELTKYSSR 379

Query: 380 LELRVKMLSGLAMNITLLIQQLAGVIMIVFGVYQIIDGHLSMGGLIACYMLSGRALSPLA 439
               +K +S  A+N T+LIQQ+  V +++ G Y+  +G ++MG ++A  ML+ RA +PL 
Sbjct: 380 TSEDIKHISTNAINTTMLIQQMVSVFIVIAGTYEFSEGRIAMGAIVATVMLASRAGAPLG 439

Query: 440 SLSGLLTRYQQARVTMTSVDQMMELPQERNFEERPLSRKVLQGGIECRQLNFTYPQQQNL 499
            ++  L R++QA +++  +D++ME P +R      ++R++  GG   + ++F YP   + 
Sbjct: 440 QIAMTLARFRQATMSLRILDKIMEQPDDRPSTVGFVNRQIAHGGFSFQNVSFQYPGSDHP 499

Query: 500 ALKNINLSISPGEKVGIIGRSGSGKSSLAKLLVGLYQPDDGALLVDGVDIRQIDVSELRY 559
            +  ++ ++ PGEK+GIIGR GSGK++L +LL GL+ P  G +L+DGVDIRQ  ++E+R 
Sbjct: 500 VINGLSFNVRPGEKIGIIGRIGSGKTTLGRLLDGLFAPAAGRVLIDGVDIRQYHMAEVRS 559

Query: 560 NIGYVPQDIQLLAGTLRDNLVSGARYVEDELVLQAAELAGVHEYARLHPQGYELQVGERG 619
            +    Q   L +GT+++NL+ G     DE +LQ A + GV E+   HP+G+++ VGERG
Sbjct: 560 AVAVAGQSSDLFSGTVKENLLIGRADATDEELLQVARITGVDEFVGNHPRGFDMPVGERG 619

Query: 620 QNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERLKQRLA-AVIENKTMVLVTH 678
            NLS GQ+Q + +AR LL  P I+ LDEP+ AMD   E  L  RL+ A     T+++ TH
Sbjct: 620 TNLSSGQKQALTIARLLLTKPKIVFLDEPSGAMDLATERHLISRLSNAFGPETTLLIATH 679

Query: 679 RASLLSLVDRLIVVDRGQILADGPKAAVMEALKKGQISVA 718
           R S+L LVDRLIV+D+G+I+ADGPK AV++A+++ + + A
Sbjct: 680 RHSMLELVDRLIVIDKGKIIADGPKQAVIQAMQQPRPAAA 719