Pairwise Alignments

Query, 286 a.a., Transcriptional regulator, RpiR family from Pseudomonas fluorescens GW456-L13

Subject, 288 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  105 bits (261), Expect = 2e-27
 Identities = 78/278 (28%), Positives = 130/278 (46%), Gaps = 3/278 (1%)

Query: 1   MDILYQIRARQDSFSAGEGRIARLMLDDVGFAASASLDELALRAEVSSATLSRFARTVGC 60
           M++L  I   +      E ++A  +L D      +S+ +LA    +S  T+ RF R +GC
Sbjct: 1   MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC 60

Query: 61  KDLRDLRLQLAQASGVGSRFLDPAGTPEQS-AFYGQIVGDIE-STLRQHLAAFDESHFAD 118
              +DL+L+LAQ+   G+ F   A   + S A Y   + D    TL +     D      
Sbjct: 61  SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREKLDPVELQK 120

Query: 119 AAKLLGKARMIHAFGMGGCSTLCSDELQVRLVRLGYPIAVCHDAVMMRVTAASLSAEHVV 178
           A   + +A+ +  +G G    + +D  Q +  RL    A   D  M  ++A +L    V 
Sbjct: 121 AVTAMSQAQRVEFYGFGASGAVAADA-QHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVA 179

Query: 179 IVCSLTGITPELIETVELARNYGAGILAITRADSPLAQLADIVLPLQSAETSFIYKPTAA 238
           I  S +G + +L+ T  L R  GA ++ +  + +PLA+L+ + L +   E + IY P  +
Sbjct: 180 ICISQSGRSKDLLITANLVRESGASLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTS 239

Query: 239 RYGMLLAIDVLATELALANPEDNQERLRRIKLALDEYR 276
           R   L+ IDVLA  +A+A        L+ +K +L   R
Sbjct: 240 RIAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLR 277