Pairwise Alignments

Query, 286 a.a., Transcriptional regulator, RpiR family from Pseudomonas fluorescens GW456-L13

Subject, 288 a.a., Helix-turn-helix protein RpiR:Sugar isomerase (SIS) from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  134 bits (337), Expect = 2e-36
 Identities = 87/277 (31%), Positives = 144/277 (51%), Gaps = 3/277 (1%)

Query: 2   DILYQIRARQDSFSAGEGRIARLMLDDVGFAASASLDELALRAEVSSATLSRFARTVGCK 61
           ++L QI+ R D  +  E ++A ++L +   A   S+  LA  A+VS  T++RF R+    
Sbjct: 6   NLLEQIQGRLDELNKAERKVAEVILLNPQMATRLSIAALAQAAKVSEPTVNRFCRSFSVS 65

Query: 62  DLRDLRLQLAQASGVGSRFLDPAGTPEQS--AFYGQIVGDIESTLRQHLAAFDESHFADA 119
              +L+LQLAQ+   G+ ++  A   + +  A+  +I G   ++L       D +  + +
Sbjct: 66  GYPELKLQLAQSLASGAAYVSRAVEADDNPEAYTQKIFGSAIASLDSACQQLDPALISKS 125

Query: 120 AKLLGKARMIHAFGMGGCSTLCSDELQVRLVRLGYPIAVCHDAVMMRVTAASLSAEHVVI 179
             +L +AR IH FG+G  + +  D  Q +  R    +    D +M R+ A+      + +
Sbjct: 126 VDMLIQARQIHFFGLGASAPVALDA-QHKFFRFNLAVTAHADVLMQRMIASVAHTGELFV 184

Query: 180 VCSLTGITPELIETVELARNYGAGILAITRADSPLAQLADIVLPLQSAETSFIYKPTAAR 239
           + S TG T EL+E   +AR  GA +L +T A SPLAQ + + L +   E + IY P  +R
Sbjct: 185 IISYTGRTRELVEVARIARANGASVLGLTAAGSPLAQASTVSLNIPLPEDTDIYMPMTSR 244

Query: 240 YGMLLAIDVLATELALANPEDNQERLRRIKLALDEYR 276
              L  +DVLAT + L    D Q  LR+IK +L++ R
Sbjct: 245 IIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNDSR 281