Pairwise Alignments

Query, 286 a.a., Transcriptional regulator, RpiR family from Pseudomonas fluorescens GW456-L13

Subject, 289 a.a., HTH-type transcriptional regulator HexR from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  134 bits (338), Expect = 2e-36
 Identities = 89/288 (30%), Positives = 150/288 (52%), Gaps = 3/288 (1%)

Query: 1   MDILYQIRARQDSFSAGEGRIARLMLDDVGFAASASLDELALRAEVSSATLSRFARTVGC 60
           M++L +I+++ +  S  E ++A ++L     A  +S+  +AL A VS  T++RF R++  
Sbjct: 1   MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60

Query: 61  KDLRDLRLQLAQASGVGSRFLDPAGTPEQS--AFYGQIVGDIESTLRQHLAAFDESHFAD 118
           +   D +L LAQ+   G+ +++     + S  ++ G+I     +TL     + D+S    
Sbjct: 61  RGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINR 120

Query: 119 AAKLLGKARMIHAFGMGGCSTLCSDELQVRLVRLGYPIAVCHDAVMMRVTAASLSAEHVV 178
           A  LL +A+ I  FG+G  + +  D +  +  R   P+    D V+ R++  + S   VV
Sbjct: 121 AVDLLTQAKKIAFFGLGSSAAVAHDAMN-KFFRFNVPVVYSDDIVLQRMSCMNCSDGDVV 179

Query: 179 IVCSLTGITPELIETVELARNYGAGILAITRADSPLAQLADIVLPLQSAETSFIYKPTAA 238
           ++ S TG T  L+E  +LAR   A ++A+T A +PLA+ A + + L   E + IY P  +
Sbjct: 180 VLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVS 239

Query: 239 RYGMLLAIDVLATELALANPEDNQERLRRIKLALDEYRGGDDHLPLGD 286
           R   L  IDVLAT   L      ++ L+R+K AL E R     L L D
Sbjct: 240 RLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKQLLNLSD 287