Pairwise Alignments

Query, 612 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens GW456-L13

Subject, 641 a.a., Transcriptional activator of acetoin dehydrogenase operon AcoR from Variovorax sp. SCN45

 Score =  291 bits (744), Expect = 8e-83
 Identities = 205/624 (32%), Positives = 308/624 (49%), Gaps = 25/624 (4%)

Query: 2   AAPASPLSHDAIIQDSWSRC-RAFGLSHQSTPAFDPLPAAGIAQLLESQHSLVQTTHQEV 60
           AA A P    +++  SW+RC R  GL          LPA  +    +     ++     +
Sbjct: 19  AALADPTQ--SLVHKSWARCVRDHGLDPSKPTPARILPAQEVRAHQQQLEHFLRAARAGM 76

Query: 61  LPYYENILSNSNCLIMLADHQGQVLTSWGTQRFIEPKLARGFSAGASWMERCTGTNAIGT 120
              Y  + ++   +++L D +G  +   G   + +     G   GA W E   GT  +GT
Sbjct: 77  EDIYRRV-ADLGYMVLLTDAEGITVDYIGNPAWDDQLRKAGLYLGADWNEAHAGTCGVGT 135

Query: 121 ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDTERKVIAVLDVS---SDSYLPPSHTLG- 176
            L   Q +     EHF   +  +T + AP+FD   K+ A+LDVS   S       H +  
Sbjct: 136 CLVERQPMTCHQTEHFDATHIALTCTTAPLFDHSGKLTAILDVSALRSPEAKESQHLVRH 195

Query: 177 MVKMMSQTVENRLILNLFHGQHFQLTFNTGLNNLDSQWAGLLIFDETGQVLSANRRADNL 236
           +V M ++ +E+   L  F G H+ L   +    +D     +L FD+ G +  AN  A   
Sbjct: 196 LVSMYARMIEDADFLRNFRG-HWILRLGSAFGLVDVAGEVMLAFDDGGTLAGANGGARQA 254

Query: 237 LGISLSRVSVESLFKVSLLELLNQPEG------LPFS--LQASGRNRFQCLLKRPKQVPI 288
                   +V  L  + +  +     G      +PF+  +   G   +   L  P+    
Sbjct: 255 FAGHALSGAVSELLHMPMDAIWRIGNGGAISPLMPFAHTVLLPGGGEYHASLIAPRSRRA 314

Query: 289 QPRVFAEPAVTAPTPAAISLNTLHFGDIRVEKAVRQAERLLEKDIPLLIHGETGVGKEVF 348
           Q    A P+   P+     L  +   D  ++K + QA RL+++ I +L+ GETG GKEV 
Sbjct: 315 QAPATAAPSAR-PSDRLPPLERIAGDDPAMQKLLAQARRLVDRGIHVLVEGETGSGKEVL 373

Query: 349 VKALHQASSRSKQAFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTL 408
            +ALH ASSR+   F+AVNCAAIP  L+ESELFGY  G+FTG   KG  GLI +AD+GTL
Sbjct: 374 ARALHSASSRAAMPFVAVNCAAIPDSLIESELFGYTPGSFTGGRAKGMKGLIAQADRGTL 433

Query: 409 FLDEIGDMPLPTQARLLRVLQERCVQPVGSSELFPVDLRIISATNRSLREQVQLGRFRED 468
           FLDEIGDMP+  Q RLLRVL E  V P+G+     VD+ +++AT+R L   V  GRFRED
Sbjct: 434 FLDEIGDMPMALQTRLLRVLSEGEVLPLGAESPQRVDIAVVAATHRHLPGLVASGRFRED 493

Query: 469 LYYRIGGLTLELPPLRERSDKEALFKRLWEQHRE--PSQWAGLSREVLELFERHPWPGNL 526
           LYYR+ G  L+LPPLR R D   L + ++ +     PS  A LS E ++    H WPGNL
Sbjct: 494 LYYRLCGAVLKLPPLRARGDMRYLIEGMFNEEAAAMPSP-ARLSEEAMQRLLAHDWPGNL 552

Query: 527 RQVSSVMQVALAMAEEQPIRPEHLPDDFFVDLEMEPVETPEPLTVDLNDVEDLNRQLQAA 586
           R++ + +++ALA+     +  +    D  +    + V   EP      +   L   L+  
Sbjct: 553 RELRNALRLALALCTGASVSAQ----DLQLQARADTVCDTEPDEDVAAEARRLLDALKRH 608

Query: 587 GGNISYLARRLGVSRNTLYKRLRQ 610
              +++ A  LG+SR T Y+ +++
Sbjct: 609 RWRVAHAADELGMSRATAYRHMKR 632