Pairwise Alignments

Query, 612 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens GW456-L13

Subject, 614 a.a., Acetoin catabolism regulatory protein from Pseudomonas sp. RS175

 Score = 1130 bits (2923), Expect = 0.0
 Identities = 569/614 (92%), Positives = 588/614 (95%), Gaps = 3/614 (0%)

Query: 1   MAAPASPLSHDAIIQDSWSRCRAFGLSHQSTPAFDPLPAAGIAQLLESQHSLVQTTHQEV 60
           MAAPA  LSHDAIIQ SWSRCRAFGL HQS P+FDPLPA G+AQLLESQHSLVQTTHQEV
Sbjct: 1   MAAPAPVLSHDAIIQASWSRCRAFGLDHQSVPSFDPLPAEGVAQLLESQHSLVQTTHQEV 60

Query: 61  LPYYENILSNSNCLIMLADHQGQVLTSWGTQRFIEPKLARGFSAGASWMERCTGTNAIGT 120
           LPYYENILSNSNCLIMLAD+QGQVLTSWGTQRFIEPKLA GFSAGASWMERCTGTNAIGT
Sbjct: 61  LPYYENILSNSNCLIMLADNQGQVLTSWGTQRFIEPKLAHGFSAGASWMERCTGTNAIGT 120

Query: 121 ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDTERKVIAVLDVSSDSYLPPSHTLGMVKM 180
           ALACEQAVHIEHDEHFLKANRFMTGSAAPIFD ERKVIAVLDVSSDSYLPPSHTLGMVKM
Sbjct: 121 ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDAERKVIAVLDVSSDSYLPPSHTLGMVKM 180

Query: 181 MSQTVENRLILNLFHGQHFQLTFNTGLNNLDSQWAGLLIFDETGQVLSANRRADNLLGIS 240
           MSQTVENRLILNLF G+HFQLTFNTGLNNLDSQWAGLLIFDETGQVLSANRRADNLLG+S
Sbjct: 181 MSQTVENRLILNLFRGEHFQLTFNTGLNNLDSQWAGLLIFDETGQVLSANRRADNLLGLS 240

Query: 241 LSRVSVESLFKVSLLELLNQPEGLPFSLQASGRNRFQCLLKRPKQVPIQPRVFAEPAVTA 300
           LSRVS+ESLFKVSLL+LLNQP+GLPFSLQA+GRNRFQC+LKRP Q+ I+PRVFAEP   A
Sbjct: 241 LSRVSIESLFKVSLLDLLNQPDGLPFSLQAAGRNRFQCMLKRPSQLSIKPRVFAEPT-PA 299

Query: 301 PTPA--AISLNTLHFGDIRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSR 358
           P PA  AISLNTLHFGD RVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSR
Sbjct: 300 PAPAGNAISLNTLHFGDSRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSR 359

Query: 359 SKQAFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPL 418
            KQ FIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKAD+GTLFLDEIGDMPL
Sbjct: 360 CKQPFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADRGTLFLDEIGDMPL 419

Query: 419 PTQARLLRVLQERCVQPVGSSELFPVDLRIISATNRSLREQVQLGRFREDLYYRIGGLTL 478
           PTQARLLRVLQERCVQPVGS+ELFPVD+RIISATNRSLREQVQLGRFREDLYYRIGGLTL
Sbjct: 420 PTQARLLRVLQERCVQPVGSAELFPVDIRIISATNRSLREQVQLGRFREDLYYRIGGLTL 479

Query: 479 ELPPLRERSDKEALFKRLWEQHREPSQWAGLSREVLELFERHPWPGNLRQVSSVMQVALA 538
           ELPPLRERSDK+ALFKRLWE HREP+QWAGLSREVLELFERHPWPGNLRQVSSV+QVALA
Sbjct: 480 ELPPLRERSDKQALFKRLWEHHREPTQWAGLSREVLELFERHPWPGNLRQVSSVLQVALA 539

Query: 539 MAEEQPIRPEHLPDDFFVDLEMEPVETPEPLTVDLNDVEDLNRQLQAAGGNISYLARRLG 598
           MAEEQPIRPEHLPDDFFVDLEMEPVE PEPL VDLND EDLNRQLQA GGNIS+LARRLG
Sbjct: 540 MAEEQPIRPEHLPDDFFVDLEMEPVEQPEPLAVDLNDAEDLNRQLQAVGGNISHLARRLG 599

Query: 599 VSRNTLYKRLRQTE 612
           VSRNTLYKRLRQ E
Sbjct: 600 VSRNTLYKRLRQLE 613