Pairwise Alignments

Query, 255 a.a., 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) from Pseudomonas fluorescens GW456-L13

Subject, 296 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Rhizobium sp. OAE497

 Score =  123 bits (309), Expect = 4e-33
 Identities = 87/239 (36%), Positives = 130/239 (54%), Gaps = 17/239 (7%)

Query: 7   IYGVHAVEALLRHHPKRVKQIWLAEGRNDPRVQTLIELANENR-VQVGQAERREMDAWV- 64
           +YG+H V A L +  +R   I L+  +N       +E+  E   + V      ++D  + 
Sbjct: 66  LYGLHTVRAALDNKERR--NIKLSVTQN---ALVRLEIDPETLGIPVEMVAPHDIDKMLG 120

Query: 65  -EGVHQGVVADVSPSQVWGEAMLDELLDRTDGAPLLLVLDGVTDPHNLGACLRSADAAGA 123
            + +HQGV+ +  P  V         L+    +PLLLVLD VTDPHN+GA +RSA A  A
Sbjct: 121 PDAIHQGVMLETRPLPV-------RRLEALKDSPLLLVLDQVTDPHNVGAIMRSAVAFNA 173

Query: 124 LAVIVPKDKSATLTPVVRKIACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEVS 183
            AVI  +  S T + V+ K A GA E+IP + +TNLA  + +L + G   +G   E    
Sbjct: 174 GAVITTQRHSPTESGVMAKSASGALELIPYIQITNLADAVGELHKLGFVTIGLDSEGPAP 233

Query: 184 LYDQDLTGPTI-LIMGAEGKGMRRLTREHCDYLVNLPMAGSVSSLNVSVATGVCLFEAQ 241
           L +   TG  + L++G+EGKG+R+ TRE  + L  L M G++ SLNVS A  + L+ A+
Sbjct: 234 L-EGTFTGEKVALVLGSEGKGLRQKTRETVNALARLDMPGAIKSLNVSNAAAIALYAAR 291