Pairwise Alignments

Query, 255 a.a., 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) from Pseudomonas fluorescens GW456-L13

Subject, 234 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Fusobacterium nucleatum SB010

 Score =  142 bits (357), Expect = 8e-39
 Identities = 79/236 (33%), Positives = 133/236 (56%), Gaps = 10/236 (4%)

Query: 4   LEKIYGVHAVEALLRHHPKRVKQIWLAEGRNDPRVQTLIELANENRVQVGQAERREMDAW 63
           +E+I G++ V   L +  K ++++ L  G     VQ L +LA++  +++    ++  ++ 
Sbjct: 1   MERIIGINPVTEALLNKEKNIEKLELYNGLKGETVQKLKDLASKRNIKIFYTGKKIDNS- 59

Query: 64  VEGVHQGVVADVSPSQVWGEAMLDELLDRTDGAP--LLLVLDGVTDPHNLGACLRSADAA 121
                QGV   +S    + +   DE  +   G    L+L+LD + DP N GA +RSA+  
Sbjct: 60  -----QGVAVYISNYDYYKD--FDEAYEELVGKAKSLVLILDEIQDPRNFGAIIRSAEVF 112

Query: 122 GALAVIVPKDKSATLTPVVRKIACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAE 181
               +I+P+  S  +   V K + GA E + +  VTNL+ T+ KL++   WV G AGEA 
Sbjct: 113 KVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNLSDTINKLKKLDYWVYGAAGEAN 172

Query: 182 VSLYDQDLTGPTILIMGAEGKGMRRLTREHCDYLVNLPMAGSVSSLNVSVATGVCL 237
           ++  ++D     +L++G EG G+R+  REHCD L+ +PM G ++SLNVSVA+G+ L
Sbjct: 173 INYNEEDYPDKVVLVLGNEGSGIRKKVREHCDKLIKIPMYGQINSLNVSVASGILL 228