Pairwise Alignments

Query, 255 a.a., 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) from Pseudomonas fluorescens GW456-L13

Subject, 251 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Acinetobacter radioresistens SK82

 Score =  222 bits (566), Expect = 5e-63
 Identities = 124/252 (49%), Positives = 173/252 (68%), Gaps = 6/252 (2%)

Query: 1   MSQLEKIYGVHAVEALLRHHPKRVKQIWLAEGRNDPRVQTLIELANENRVQVGQAERREM 60
           M++ E  YGVHAVE+LL   P+RV  ++  +GR D R+Q ++ELA    + V +A R  +
Sbjct: 1   MAKPEYYYGVHAVESLLELEPERVLTLFTLKGREDQRLQKILELAEPFGISVQKASRDSL 60

Query: 61  DAWVEGV--HQGVVADVSPSQVWGEAMLDELLDRTDGAPLLLVLDGVTDPHNLGACLRSA 118
           +  + G+  HQGVVA V P  V  E  L++LL++T    LLL LD VTDPHNLGAC+R+A
Sbjct: 61  EK-LAGLPFHQGVVAAVRPHPVMNEKDLEQLLEQTPDV-LLLALDQVTDPHNLGACIRTA 118

Query: 119 DAAGALAVIVPKDKSATLTPVVRKIACGAAEVIPLVAVTNLARTLEKLQQRG-LWVVGT- 176
            A G  AVIVP+D+SA+LTP  RK+A G AE +  + VTNLARTL ++++   + V+GT 
Sbjct: 119 AAMGVQAVIVPRDRSASLTPTARKVAAGGAEKVKFIQVTNLARTLAQMKEHSQVRVIGTM 178

Query: 177 AGEAEVSLYDQDLTGPTILIMGAEGKGMRRLTREHCDYLVNLPMAGSVSSLNVSVATGVC 236
             E  + L   DLTGP +++MGAE  G+R +T+  CD+ V +PMAG++ SLNVSVATG+ 
Sbjct: 179 LDEQALPLQQCDLTGPIVIVMGAEDTGLRPITQAQCDHKVYIPMAGNLQSLNVSVATGMA 238

Query: 237 LFEAQRQRSVKA 248
           L+EA RQR+ K+
Sbjct: 239 LYEACRQRNAKS 250