Pairwise Alignments

Query, 518 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  145 bits (366), Expect = 4e-39
 Identities = 88/258 (34%), Positives = 141/258 (54%), Gaps = 4/258 (1%)

Query: 258 RRRLSVEGQVRNALRRGDFFLAYLPLVDVASRNWVGAEALLRWRHARHGVLMPNAFIPWI 317
           R    +E ++R ALRR +  L Y P +++A    VG EAL+RWRHA  G+L P+ F+P  
Sbjct: 291 RSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFVPLA 350

Query: 318 ETSPLIHDTTRWVLLQAARDLSHMSQK-VPDFSLAVNVPPVQFSDTRLVQMADEAFGTRP 376
           E S LI     WV+ +A RD+  + ++ +    +AVN+   QF D++L+           
Sbjct: 351 EQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLILEHG 410

Query: 377 LALCQVVFELTERQALDYDAPALGEVLRDLRRRGAQIAVDDFGVGFSNLALLGMIEVDFV 436
           +    + FELTE   +  +   + + +  L R G + ++DDFG GFS+   L  + +  +
Sbjct: 411 VDARWLEFELTETAVMRRN-EVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLL 469

Query: 437 KIDRSFLREEAWTEPH--MLEAMVPLLRDLGVLIIAEGIETERQLERIRSCGIRFAQGFL 494
           K+DRSF+ E    E +  ++ AM+ L  +L + ++AEG+E+E QL  +R  G    QGFL
Sbjct: 470 KVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQGFL 529

Query: 495 FSRPIELEALLDGLPALP 512
            SRP+ +  L+  L   P
Sbjct: 530 VSRPLPIGELMAYLLQAP 547