Pairwise Alignments

Query, 518 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 693 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  141 bits (355), Expect = 9e-38
 Identities = 88/253 (34%), Positives = 135/253 (53%), Gaps = 4/253 (1%)

Query: 255 SLVRRRLSVEGQVRNALRRGDFFLAYLPLVDVASRNWVGAEALLRWRHARHGVLMPNAFI 314
           S +RRR  +E  +R AL R   +L Y P +       VG EALLRW+H   G++ P+ FI
Sbjct: 427 SEMRRRRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQHPELGMVPPDQFI 486

Query: 315 PWIETSPLIHDTTRWVLLQAARDLSHM-SQKVPDFSLAVNVPPVQFSDTRLVQMADEAFG 373
           P  E +  I     WVL QA R L     Q   D  +AVN+  VQ   + L ++ +    
Sbjct: 487 PLAEQNGSIISIGEWVLDQACRQLREWHDQGFSDLRMAVNLSTVQLHHSELPRVVNNLLQ 546

Query: 374 TRPLALCQVVFELTERQALDYDAPALGEVLRDLRRRGAQIAVDDFGVGFSNLALLGMIEV 433
              L    +  E+TE   ++ D     + L  LRR GA IA+DDFG G+S+L+ L  + +
Sbjct: 547 AYRLPPRSLELEVTETGLME-DISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPL 605

Query: 434 DFVKIDRSFLRE--EAWTEPHMLEAMVPLLRDLGVLIIAEGIETERQLERIRSCGIRFAQ 491
           D +KID+SF+++  +   +  ++ A++ L + LG+ +IAEG+ET  Q   I + G    Q
Sbjct: 606 DKIKIDKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIVAQGCHEGQ 665

Query: 492 GFLFSRPIELEAL 504
           G+ +S+P+    L
Sbjct: 666 GYHYSKPLSAREL 678