Pairwise Alignments

Query, 552 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  134 bits (337), Expect = 5e-36
 Identities = 89/293 (30%), Positives = 153/293 (52%), Gaps = 10/293 (3%)

Query: 257 VQNVWYGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQELIRQKAPYL 316
           +Q +  GL+LGSV  L AIG  + +G++G+IN AHGE+ M+ AY   +   L+       
Sbjct: 6   LQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVES 65

Query: 317 FDWSLTIALPLAFLFTALVGILIERTVIRFLYGRP-LETLLATWGVSLILQQAVRSVFGP 375
           F   +   L    + T + G  IER   + L     L  L++  G+SLILQ   +   G 
Sbjct: 66  FPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGA 125

Query: 376 TNQEVGAPSWMSGAFQI----GQLSITYNRLWIICFALIVFFTLLLVLRRTPLGLYVRAV 431
             Q  G P+ + GA ++    G + +TY +++I+  A +    L  V++ T LG   RA 
Sbjct: 126 RQQ--GVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRAT 183

Query: 432 TQNRRMAAAMGIRTGRIDALTFGLGSGIAGIAGVALSQIDNVSPNLGQGYI--IDSFMVV 489
            Q+R+MA+ +GI T R+ +  F +G+ +A +AGV ++ ++  + +   G+I  I +F   
Sbjct: 184 QQDRKMASILGINTDRVISYVFVIGAVMAALAGVLIT-MNYGTFDFYAGFIIGIKAFTAA 242

Query: 490 VFGGVGNLWGTLVGAFTLGVANKLLEPFAGAVLGKILLLVFIILFIQKRPRGL 542
           V GG+G+L G ++G   LG++  L      +    +     +++ +  RP+GL
Sbjct: 243 VLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGL 295