Pairwise Alignments

Query, 377 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 330 a.a., Broad-specificity amino acid ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  111 bits (277), Expect = 3e-29
 Identities = 96/332 (28%), Positives = 152/332 (45%), Gaps = 54/332 (16%)

Query: 50  KYLCYALLAVAVDLVWGYCGVLSLGHGAFFALGGYAMGMYLMRQIGARGVYGNPVLPDFM 109
           K +C+AL A A +L+ G+ G+LS GH AF     Y  G        A  V+G        
Sbjct: 33  KLMCFALFAAAFNLLLGFTGLLSFGHAAFLGGSAYVAGH-------AMKVWG-------- 77

Query: 110 VFLNYKELPWFWEGFNIFPFAMLMVVLVPGA-LAFVFGWFAFRSRVTGVYLSIITQAMTF 168
                           + P   L+   + GA L +VFG  A R +  G+Y ++IT A+  
Sbjct: 78  ----------------LTPELGLIAGTLTGAFLGWVFGVLAIRRQ--GIYFAMITLAL-- 117

Query: 169 ALMLAFFRNDMGF-GGNNGLTDFKDILGFPISAPSTRLVLFVLSAAALAAGYVLCRALVT 227
           A M+ F      F GG +GL        F +   S+ L ++ ++   + A ++L    + 
Sbjct: 118 AQMMFFVALQAKFTGGEDGLQGVPRGKLFGLIDLSSDLTMYYVALVIVVAAFLLIVRTIH 177

Query: 228 SKYGKVLVAVRDAESRTRFLGYRVENYKLVAWVFSAMLAGVAGALYVPQVGIINPSEFAP 287
           S +G+VL  +++ E R   LGY V  +KL+A+V SA L+G+AG+L    +G    S+   
Sbjct: 178 SPFGQVLKGIKENEPRALSLGYDVSRFKLLAFVISAALSGLAGSLKTLVLGFATLSDVHW 237

Query: 288 AQSIEMVIWVAVGGRGTLVGAALGALIV-----NAGK-----------TWFTGVLPEAWL 331
             S ++++   VGG GTL G  +G+ +V       G+            WF   L E+  
Sbjct: 238 TASGQVILMTLVGGLGTLSGPLVGSAVVVLLENKIGELGSFLARITTIDWF-NTLGESVT 296

Query: 332 FALGALFVLVTLFLPKGVLGLAASLSEKWKAR 363
              G +FV+  L   KG++G   +  E+ K R
Sbjct: 297 MVTGLIFVICVLAFRKGIMGEIIAFIERRKGR 328