Pairwise Alignments

Query, 377 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  110 bits (274), Expect = 7e-29
 Identities = 99/356 (27%), Positives = 155/356 (43%), Gaps = 54/356 (15%)

Query: 15  LIAVLAAGVLIPASNLLLPAGNPLHVPDYMIPLLGKYLCYALLAVAVDLVWGYCGVLSLG 74
           L  V+A+ V +P   LLLP+            L  + L +A+ A+A +L+ GY G+LS G
Sbjct: 18  LSLVVASLVALP---LLLPSAT----------LATEILIFAMAALACNLLLGYTGLLSFG 64

Query: 75  HGAFFALGGYAMGMYLMRQIGARGVYGNPVLPDFMVFLNYKELPWFWEGFNIFPFAMLMV 134
            G FF +G Y   + ++                         L W         FA L+ 
Sbjct: 65  QGIFFGVGAYGAALLMIH------------------------LQWGM-------FAALLG 93

Query: 135 VLVPGA-LAFVFGWFAFRSRVTGVYLSIITQAMTFALMLAFFRNDMGFGGNNGLTDFK-- 191
             V GA LA + G  A R   TG+Y  ++T A +       +      GG+NGL D    
Sbjct: 94  AAVFGAFLALLVGALAIRR--TGIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRP 151

Query: 192 --DILGFPISAPSTRLVLFVLSAAALAAGYVLCRALVTSKYGKVLVAVRDAESRTRFLGY 249
             +I G  +   +     +V  A      +     ++ S +G  L+A+R+ E+R   +GY
Sbjct: 152 NIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGY 211

Query: 250 RVENYKLVAWVFSAMLAGVAGALYVPQVGIINPSEFAPAQSIEMVIWVAVGGRGTLVGAA 309
              ++K++ ++ S  + G+AGALY   +     S      S  ++I   VGG G+L G+ 
Sbjct: 212 DTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSL 271

Query: 310 LGA-LIVNAGKTWFTGVLPEAWLFALGALFVLVTLFLPKGVLGLAASLSEKWKARR 364
           LGA  IV  G       L   WL  LG + +LV +F+  G+ G    L ++  A R
Sbjct: 272 LGAGAIVLLGDV--LSELWPRWLMLLGVILILVVVFMRGGLWGGLTELGKRLLATR 325