Pairwise Alignments

Query, 616 a.a., Lipid A export ATP-binding/permease protein MsbA from Xanthobacter sp. DMC5

Subject, 601 a.a., lipid transporter ATP-binding/permease from Pseudomonas simiae WCS417

 Score =  269 bits (687), Expect = 3e-76
 Identities = 172/515 (33%), Positives = 286/515 (55%), Gaps = 18/515 (3%)

Query: 76  AVSGIVMVLSIIKGASAYGQSITMARIGNRVVADNQKRAFDRLLLQDAAYFGHRHTAEIT 135
           AV  ++++++  +G  ++  +  +A++   +V D + + F+ LL     YF + ++  + 
Sbjct: 80  AVPLLIILIAAWQGLGSFLGNYLLAKVSLGLVHDLRVQLFNNLLTLPNRYFDNHNSGHLI 139

Query: 136 TRFTAGASGARGALDLVVTSIGRDALSLVMLAGVAFVQDPFLAVIALVVMPAAVIGTRKL 195
           +R T   +   GA    +  + R+ ++++ L       +  L ++ + ++P   +     
Sbjct: 140 SRITFNVTMVTGAATDAIKVVIREGMTVIFLFASLLFMNWRLTLVMIAILPLIAVMVSTA 199

Query: 196 IKKAKTIFTTGFTSGVKLSSIVMEVFQGIRTVKAYTLEPVMRERTHKFIDDVEINAN--- 252
            KK +        +   ++ +  E  QG R V+++  E    +R   F+   + N N   
Sbjct: 200 SKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEVYEEKR---FLKASQSNTNKQL 256

Query: 253 RLVRTQAKSSPLMETLGGLAIGGVILYAGYNVIELGRSPGQFFSVLTALLLAYEPAKRLS 312
           R+ RT A  +P ++ +   A+  ++    Y  +    S G   + +T   L  +P ++LS
Sbjct: 257 RMTRTGAIYTPALQLVIYTAMAVLMFLVLY--LRGDASAGDMVAYITLAGLLPKPIRQLS 314

Query: 313 RLHVELVSHVMGARMLFDLLDAPAPDADSSGVGALPRPR--GRVEFKDVVFAYRPG--EN 368
            +   +   V GA  +F+ LD    + D    G + R +  GR++ +++ F Y PG   +
Sbjct: 315 EVSSTIQKGVAGAESIFEQLDEEV-EVDR---GTIERDKVSGRLDVRNLNFTY-PGTERH 369

Query: 369 VLRSLDLVAEPGRTTALVGQSGGGKTTIINLIERFYDPQSGAVLIDDVDTRSVSRTSVRA 428
           VL+ +   AEPG+  ALVG+SG GK+T+ +LI RFY  +SG +L+D ++  +    ++R 
Sbjct: 370 VLKDISFTAEPGQMIALVGRSGSGKSTLASLIPRFYHHESGEILLDGIEIENYKLLNLRK 429

Query: 429 SVALVSQDVYLFSGTIRENIGFGR-PGASEEEIVAAAKAAHAHPFIMSFENGYDTAVGEH 487
            +A V+Q V LFS T+  NI +G   GA   E+ AAA  A+A  FI     G+DT VGE+
Sbjct: 430 HIAQVTQHVTLFSDTVTNNIAYGDLAGAPRAEVEAAAADANAKDFIDQLPKGFDTQVGEN 489

Query: 488 GAQLSGGQRQRIAIARAFLKNAPILLLDEATAALDSESEAEVQKALAELAHERTTIVIAH 547
           G  LSGGQRQR+AIARA LKNAP+L+LDEAT+ALD+ESE  +Q AL ++   RTT+VIAH
Sbjct: 490 GVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMQGRTTLVIAH 549

Query: 548 RLQTVVRADRICVIEGGRVVESGTHDELIARRGRY 582
           RL T+ +AD I V++ GR+VE GTH EL+A+ G Y
Sbjct: 550 RLSTIEKADLILVMDDGRIVERGTHGELLAQNGYY 584