Pairwise Alignments

Query, 616 a.a., Lipid A export ATP-binding/permease protein MsbA from Xanthobacter sp. DMC5

Subject, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

 Score =  257 bits (656), Expect = 1e-72
 Identities = 178/523 (34%), Positives = 267/523 (51%), Gaps = 17/523 (3%)

Query: 62  VNAIFVHP--TPAAVWAVSGIVMVL--SIIKGASAYGQSITMARIGNRVVADNQKRAFDR 117
           ++ + VH   T   V A+  +V+VL  +++ G   Y  + T +RI   + A    + F  
Sbjct: 199 MDKVLVHRGLTTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGA----KLFRH 254

Query: 118 LLLQDAAYFGHRHTAEITTRFTAGASGARGALDLVVTSIGRDALSLVMLAGVAFVQDPFL 177
           L+    AYF  R   +   R        R  L     ++  D L  V+   V F+   +L
Sbjct: 255 LIDLPTAYFHARRVGDSVARVRE-LENIRSFLTNNSITLVLDVLFSVVFIAVMFLYSGWL 313

Query: 178 AVIALVVMPAAVIGTRKLIKKAKTIFTTGFTSGVKLSSIVMEVFQGIRTVKAYTLEPVMR 237
            ++ +  +P   + +  +    + +    F  G +  + ++E   GI T+K+  +EP + 
Sbjct: 314 TLVVVGSLPFYFLVSLVVTPLLRALIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQV- 372

Query: 238 ERTHKFIDDVEINANRLVRTQAKSSPLMETLG--GLAIGGVILYAGYN-VIELGRSPGQF 294
             T ++ D +    +   +TQ  SS   E++G  G  +    L+ G   VIE   + G+ 
Sbjct: 373 --TRRWNDQLAAYVSASFKTQNLSSLANESVGLIGKLVTVATLWLGARLVIEGALTVGEL 430

Query: 295 FSVLTALLLAYEPAKRLSRLHVELVSHVMGARMLFDLLDAPAPDADSSGVGALPRPRGRV 354
            +         +P  RL++L        +  + L D+L+         G   LP   G++
Sbjct: 431 IAFNMLAGRVSQPIIRLAQLWTSFQQTGVSIQRLGDILNTRTEVNQGKGT-VLPTLVGQI 489

Query: 355 EFKDVVFAYRP-GENVLRSLDLVAEPGRTTALVGQSGGGKTTIINLIERFYDPQSGAVLI 413
           E   V F YRP G  V+R + L    G    +VG+SG GK+T+  LI+R Y P+ G VL 
Sbjct: 490 ELDRVCFRYRPDGGEVVRDVSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLYSPERGRVLP 549

Query: 414 DDVDTRSVSRTSVRASVALVSQDVYLFSGTIRENIGFGRPGASEEEIVAAAKAAHAHPFI 473
           D  D       S+R  + +V QD  LF  T+RENI  G P A  EE++AAA  A AH FI
Sbjct: 550 DGADLAVADVASLRRQIGVVLQDNVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFI 609

Query: 474 MSFENGYDTAVGEHGAQLSGGQRQRIAIARAFLKNAPILLLDEATAALDSESEAEVQKAL 533
           +   +GY+T +GEHGA LSGGQRQRIAIARA   N  IL+ DEAT+ALD ESE  +Q+ +
Sbjct: 610 LELPDGYETLIGEHGASLSGGQRQRIAIARALFGNPRILIFDEATSALDYESERIIQQNM 669

Query: 534 AELAHERTTIVIAHRLQTVVRADRICVIEGGRVVESGTHDELI 576
           A +  +RT I+IAHRL  V  ADRI V+E G+++E GTHDEL+
Sbjct: 670 ARICAQRTVIIIAHRLSAVRHADRIVVMERGQIIEQGTHDELL 712