Pairwise Alignments

Query, 616 a.a., Lipid A export ATP-binding/permease protein MsbA from Xanthobacter sp. DMC5

Subject, 577 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  271 bits (694), Expect = 4e-77
 Identities = 175/501 (34%), Positives = 267/501 (53%), Gaps = 22/501 (4%)

Query: 102 IGNRVVADNQKRAFDRLLLQDAAYFGHRHTAEITTRFTA-----GASGARGALDL---VV 153
           +G  +  D ++ AFD L      YF ++ T  +  R T      G     G  DL   ++
Sbjct: 81  LGINIETDMRRLAFDHLQKLSFRYFDNQKTGHLVGRLTKDLEEIGEVAHHGPEDLFIAIM 140

Query: 154 TSIGRDALSLVMLAGVAFVQDPFLAVIALVVMPAAVIGTRKLIKKAKTIFTTGFTSGVKL 213
           T IG  A  L+M   V       LA++   V+P     T +   +    F   +      
Sbjct: 141 TFIG--AFLLMMSVNVQ------LALVTAAVVPVTAWVTSRYGGRMTQNFRALYGRVGDF 192

Query: 214 SSIVMEVFQGIRTVKAYTLEPVMR---ERTHKFIDDVEINANRLVRTQAKSSPLMETLGG 270
           ++ + E   G+R V+A+  E   R   E+ ++     +++A +++      S +   L  
Sbjct: 193 NARIEENVGGMRVVQAFANEDHERSLFEKDNQKYRRTKLDAYKIMAASTSLSYMSMRLTQ 252

Query: 271 LAIGGVILYAGYNVIELGRSPGQFFSVLTALLLAYEPAKRLSRLHVELVSHVMGARMLFD 330
           +    V++   + V+    + G F   L  + + + P ++++ +       + G R   +
Sbjct: 253 MI---VMICGAWFVLNGSLTEGGFVGFLLLVGVFFRPVEKINSVIETYPKGIAGFRRFTE 309

Query: 331 LLDAPAPDADSSGVGALPRPRGRVEFKDVVFAYRPGENVLRSLDLVAEPGRTTALVGQSG 390
           LLD      D+      P   G +E++ V F Y  G+ VL ++DL    G T A VG SG
Sbjct: 310 LLDTAPDIVDAPDAIDAPALSGAIEYRHVGFGYAEGKRVLDNIDLKISAGETVAFVGPSG 369

Query: 391 GGKTTIINLIERFYDPQSGAVLIDDVDTRSVSRTSVRASVALVSQDVYLFSGTIRENIGF 450
            GKTT+ +L+ RFYD  SG++ ID +D R +   S+R  + +V QDV+LF GTIRENI +
Sbjct: 370 AGKTTLCSLLPRFYDVTSGSITIDGIDIRKMKLASLRNQIGIVQQDVFLFGGTIRENIEY 429

Query: 451 GRPGASEEEIVAAAKAAHAHPFIMSFENGYDTAVGEHGAQLSGGQRQRIAIARAFLKNAP 510
           GR GAS+EEI+ AA+ A     I +   G DT +GE G +LSGGQ+QR+AIAR FLKN P
Sbjct: 430 GRLGASDEEIMDAARRARLDGVIEAMPLGLDTVIGERGVKLSGGQKQRLAIARMFLKNPP 489

Query: 511 ILLLDEATAALDSESEAEVQKALAELAHERTTIVIAHRLQTVVRADRICVIEGGRVVESG 570
           IL+LDEAT+ALD+E+E  +Q++L ELA  RTT+VIAHRL T+  A RI V++   + E+G
Sbjct: 490 ILILDEATSALDTETERAIQQSLTELAKGRTTLVIAHRLATIRDASRIVVVDQTGIAETG 549

Query: 571 THDELIARRGRYYGFYFAQFA 591
            H EL+A +G Y   + AQF+
Sbjct: 550 AHAELLAAKGHYSRLHEAQFS 570