Pairwise Alignments

Query, 424 a.a., Outer membrane efflux protein BepC from Xanthobacter sp. DMC5

Subject, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

 Score =  112 bits (280), Expect = 2e-29
 Identities = 116/435 (26%), Positives = 194/435 (44%), Gaps = 37/435 (8%)

Query: 2   AYTNNPTLNAQRAGTRATDETVPQALSGYRPTLNATAQAGPEFAKQQASGVKTN--GWLW 59
           A  NN  L A RA   A  E VPQA +G  P L+A A+      K     + +N  G  W
Sbjct: 39  AVDNNADLAAARADYGARREVVPQARAGLLPNLSAGAEMMNTRTKLDEPSITSNRSGNSW 98

Query: 60  PRAFALNAAYTLFNGFVTANQTRNAESQVRGSRETLRNTEQSVLLNGVTAYMNVIQAIAL 119
               A    +     F    Q + AE+    +   L  TEQ+++L     Y  V++A   
Sbjct: 99  SATLA-QPIFRADRWF----QLQAAEAVNEQAALELSATEQNLILQTAQNYFAVLRAQDN 153

Query: 120 LELQNKSLAAFQQELRATRDRFNVGEVTRTDVAQAEARVADAQYQVSQAVANLSTAKANY 179
           L       AAF+++L  + +RF+VG   +TDV Q++A    A+   ++ +A      A +
Sbjct: 154 LAATKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTAR--ANRIIAERQVQDA-F 210

Query: 180 RQVIGVEPGKLTTPRSIEGTLPVSVDKV------ISTGLSSHPAVKASEFAVDAAMFQVK 233
             ++ +   + T+ + +  +LPV V         + T    +  + A+ +AV AA   ++
Sbjct: 211 EALVTLTNREYTSIQGVVHSLPVQVPTPNDAKAWVETAGRQNLNLLATNYAVSAAEETLR 270

Query: 234 VAEGGLMPNLSLQGQLSQSYDQN--FSVDSQAGA---------AMTLNLSVPIYQGGVEY 282
             + G  P L    +  +  + +  F+  SQ G          ++ L L++PIY GG+  
Sbjct: 271 QRKAGHAPTLDAVAKYQKGDNDSLGFTNPSQLGVRYSGDVEQTSVGLQLNIPIYSGGLTS 330

Query: 283 ANIRQAKELLTQARIEVDVNRDTIRAQAVQYWGALEAA----KAQIQAAQASVAANTLAL 338
           + +R+A + L+Q+    +  R+++R Q V+    L  A      Q+QA + S+ +N  AL
Sbjct: 331 SQVREAYQRLSQS----EQQRESLRRQVVENTRNLHRAVNTDVEQVQARKQSIISNQSAL 386

Query: 339 EGVREEWRVGQRTTTDVLNAQRDLTNSQSSLVVAQRDRVVAAYALVSTIGRLDALSLGLK 398
           E     ++VG R   DVL+AQR L  S      ++ D ++   +L    G L    L   
Sbjct: 387 EATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNNSRYDYILDNLSLKQAAGTLSPQDLQDL 446

Query: 399 VNYYDPRVHYNQVRD 413
             Y  P   YN  +D
Sbjct: 447 KRYLKP--DYNPDKD 459



 Score = 57.8 bits (138), Expect = 7e-13
 Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 4/197 (2%)

Query: 196 IEGTLPVSVDKVISTGLSSHPAVKASEFAVDAAMFQVKVAEGGLMPNLSLQGQLSQS--- 252
           +  T+   +  V    + ++  + A+     A    V  A  GL+PNLS   ++  +   
Sbjct: 24  VPSTVKTDLVSVYQEAVDNNADLAAARADYGARREVVPQARAGLLPNLSAGAEMMNTRTK 83

Query: 253 YDQNFSVDSQAGAAMTLNLSVPIYQGGVEYANIRQAKELLTQARIEVDVNRDTIRAQAVQ 312
            D+     +++G + +  L+ PI++    +  ++ A+ +  QA +E+      +  Q  Q
Sbjct: 84  LDEPSITSNRSGNSWSATLAQPIFRAD-RWFQLQAAEAVNEQAALELSATEQNLILQTAQ 142

Query: 313 YWGALEAAKAQIQAAQASVAANTLALEGVREEWRVGQRTTTDVLNAQRDLTNSQSSLVVA 372
            + A+  A+  + A +A  AA    L+   E + VG    TDVL +Q     ++++ ++A
Sbjct: 143 NYFAVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRIIA 202

Query: 373 QRDRVVAAYALVSTIGR 389
           +R    A  ALV+   R
Sbjct: 203 ERQVQDAFEALVTLTNR 219