Pairwise Alignments

Query, 262 a.a., Exodeoxyribonuclease III from Xanthobacter sp. DMC5

Subject, 258 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Sphingobium sp. HT1-2

 Score =  263 bits (671), Expect = 4e-75
 Identities = 140/259 (54%), Positives = 171/259 (66%), Gaps = 7/259 (2%)

Query: 1   MRIATWNANSIRQRLDHAVRWLGESRPDVVCIQEIKCQTEAFPKEPFEALGYNVSVHGQK 60
           MRIAT+N N I+ RL   + WL E+RPD+ C+QEIK   E FP +  E  GY V  HGQK
Sbjct: 1   MRIATFNINGIKARLPRLLEWLDETRPDIACLQEIKTSDETFPVKDIEDAGYGVIWHGQK 60

Query: 61  GFNGVALLSR--LPLEDVTHGLAGDDGDEQARFIEAVVSVKGGVVRVACIYLPNGNPPDT 118
           GFNGVA+L+R   P+E V  GL G+  DEQ+R++EA   VKG  VRVA IYLPNGNP   
Sbjct: 61  GFNGVAILARGDQPVE-VRRGLEGEPEDEQSRYLEA--DVKG--VRVASIYLPNGNPQPG 115

Query: 119 EKYPYKLGFMERLSAFAADRLKLEEPLVLAGDFNVIPESRDAADPAAWTSDALFLPRTRQ 178
            K+ YKL +M+RL   AA+    E P +LAGD+NVIP   D   P A   DAL  P +R+
Sbjct: 116 PKFDYKLRWMKRLRERAAEIWAEEVPAILAGDYNVIPRDVDIYSPKAMADDALMQPESRE 175

Query: 179 AFRSLLNLGFTDALRATSDAGRLFTFWDYQAGAWQRDNGIRIDHLLLSPQAADRLIATGV 238
           A+R LL  G+TD++     AG ++T+WDYQAGAW RD G RIDHLLLSP AADRL+   V
Sbjct: 176 AYRRLLGDGWTDSILTRHPAGGVWTYWDYQAGAWPRDAGFRIDHLLLSPAAADRLVDAQV 235

Query: 239 DKHVRAWEKPSDHVPVWAD 257
           DK  R  EK SDH P W +
Sbjct: 236 DKAFRGREKASDHAPTWVE 254