Pairwise Alignments

Query, 262 a.a., Exodeoxyribonuclease III from Xanthobacter sp. DMC5

Subject, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

 Score =  213 bits (543), Expect = 3e-60
 Identities = 116/259 (44%), Positives = 154/259 (59%), Gaps = 7/259 (2%)

Query: 1   MRIATWNANSIRQRLDHAVRWLGESRPDVVCIQEIKCQTEAFPKEPFEALGYNVSVHGQK 60
           ++IAT+N N IR RL   + WL   +PD+ C+QE+K   + FP+   EA GY    HGQ 
Sbjct: 4   LKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHHGQP 63

Query: 61  GFNGVALLSRL--PLEDVTHGLAGDDGDEQARFIEAVVSVKGGVVRVACIYLPNGNPPDT 118
            +NGVA+L R   PLE V  GL G + D Q+R++EA      GV+ VAC+YLPNGNP   
Sbjct: 64  SWNGVAILVRGSDPLE-VRRGLPGLEEDSQSRYLEAAAH---GVL-VACLYLPNGNPLPG 118

Query: 119 EKYPYKLGFMERLSAFAADRLKLEEPLVLAGDFNVIPESRDAADPAAWTSDALFLPRTRQ 178
            K+ YKL + E L   A    +   P +LAGDFNV+P   D  +P +W  DAL  P +R 
Sbjct: 119 PKFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESRA 178

Query: 179 AFRSLLNLGFTDALRATSDAGRLFTFWDYQAGAWQRDNGIRIDHLLLSPQAADRLIATGV 238
            ++ LL+ G+ DA+R      R++TFWDY    W R+ G+RIDHLLL+ + A  L   GV
Sbjct: 179 CYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELAPYLKRAGV 238

Query: 239 DKHVRAWEKPSDHVPVWAD 257
           D  VR   K SDH PVW +
Sbjct: 239 DAWVRNQAKASDHAPVWIE 257