Pairwise Alignments

Query, 480 a.a., DNA-binding transcriptional regulator NtrC from Xanthobacter sp. DMC5

Subject, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

 Score =  297 bits (760), Expect = 6e-85
 Identities = 180/467 (38%), Positives = 262/467 (56%), Gaps = 34/467 (7%)

Query: 6   ILVADDDAAIRTVLNQALSRAGYEVRSCGNAATLWRWVSQGDGDLVITDVVMPDENAFDL 65
           +L+ +DD  +R  L   L   G+  ++ G+A      V +    LV++DV MP  +   L
Sbjct: 5   VLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEDAFSLVVSDVNMPGMDGHQL 64

Query: 66  LPRIKKARPDLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELISIVGRALAEPKKG 125
           L ++++ +P LPV++M+A      A+ A  +GA +YL KPF+ K L+++V R  A    G
Sbjct: 65  LSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLNLVERHAAGRVTG 124

Query: 126 DGHHHAPEEQDNIPLVGRSPAMQEIYRLLARLMQTDLTVMIAGESGTGKELVARALHDYG 185
           +    A E           PA +++  L AR+ ++D TV+I+GESGTGKE++AR +H   
Sbjct: 125 EEGPVACE-----------PASRQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQS 173

Query: 186 KRRTGPFVAINMAAIPRDLIESELFGHEKGSFTGATTRNPGRFEQAEGGTLFLDEIGDMP 245
            R   PFVAIN AAIP +++E+ LFGHEKG+FTGA     G+FEQAEGGTL LDEI +MP
Sbjct: 174 PRAAQPFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMP 233

Query: 246 MEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIIAATNKDLRTLIQQGLFREDLFFRLNVVP 305
           M  Q +LLRVLQ+ E   VGGR PI  D+R++A TN+DL   +  G FREDL++RL+V P
Sbjct: 234 MALQAKLLRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFP 293

Query: 306 LRLPPLRERSEDVPDLVRHFFLQAEREGLPAK-QIDSAALDRLKRYRWPGNVRELENLVR 364
           L   PLRER  D+  L      +   +   A  ++  AA   L+ Y WPGNVREL+N ++
Sbjct: 294 LAWRPLRERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNVRELDNALQ 353

Query: 365 RLAALYPQEVITPAIIEAELSEPMPNMLSEEGPVDATLAASVERHLNTYFSGFGENLPPP 424
           R   L    VI  A  +  L+  +P     E  ++    A           G G++    
Sbjct: 354 RALILQQGGVIEAA--DFCLAGAIPLSAGTEPSLEVVADA----------GGLGDD---- 397

Query: 425 GLYHRILKDVEYPLLSAALAATRGNQIKAAELLGLNRNTLRKKIRDL 471
                 ++  EY ++   L A RG + +AAE LG++  TLR K+  +
Sbjct: 398 ------MRRHEYQMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQM 438