Pairwise Alignments

Query, 117 a.a., RNA-binding protein Hfq from Xanthobacter sp. DMC5

Subject, 86 a.a., RNA-binding protein Hfq from Pseudomonas putida KT2440

 Score = 84.0 bits (206), Expect = 4e-22
 Identities = 41/71 (57%), Positives = 55/71 (77%), Gaps = 1/71 (1%)

Query: 41  NLQDTFLNHVRKNKTPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHAISTIMP 100
           +LQD +LN +RK K P++I+LVNG+KLQG +  FD F VLL ++  SQ+VYKHAIST++P
Sbjct: 6   SLQDPYLNTLRKEKVPVSIYLVNGIKLQGSIESFDQFVVLL-KNTVSQMVYKHAISTVVP 64

Query: 101 GHPVQLFDPTD 111
             PV+L  PTD
Sbjct: 65  ARPVRLPSPTD 75