Pairwise Alignments

Query, 169 a.a., Crossover junction endodeoxyribonuclease RuvC from Xanthobacter sp. DMC5

Subject, 176 a.a., Holliday junction endonuclease RuvC (EC 3.1.22.4) from Kangiella aquimarina DSM 16071

 Score =  108 bits (271), Expect = 4e-29
 Identities = 64/155 (41%), Positives = 95/155 (61%), Gaps = 7/155 (4%)

Query: 8   ILGLDPGLRRTGWGVIDVLG----SRLSFVACGTI-LPPEAGEMAERLAFLHRGLVDVLL 62
           ILG+DPG R TG+G+I+V G    +R  ++  G I +  E  ++  +L  +   + +++ 
Sbjct: 4   ILGIDPGSRLTGFGIIEVGGQIPANRPRYITSGCIRIKDETLDL--KLKQIFDSVCELIQ 61

Query: 63  RFAPAEAAVEETFVNMNPSSTLKLGQARGVVMLAPAQMGLPVAEYAPLLVKKSVVGAGRA 122
            F P E A+E  F++ N  S LKLGQARG  ++A +   LPV+EY    VK+SVVG G A
Sbjct: 62  EFKPDEFAIESVFLSKNADSALKLGQARGAAIVAASHYALPVSEYPARKVKQSVVGTGGA 121

Query: 123 EKAQVRMMIGILLPKATPETDDASDALAIAITHAH 157
           +K QV+ M+  LL   T    DA+DALA+A+ HA+
Sbjct: 122 DKTQVQHMVKTLLKLPTSPQADAADALAVALCHAN 156