Pairwise Alignments

Query, 275 a.a., Bicarbonate transport system permease protein CmpB from Xanthobacter sp. DMC5

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score =  126 bits (317), Expect = 4e-34
 Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 18/257 (7%)

Query: 26  ARGGGLSRPLLGIAGLLVLLALW-------WLGTDVLAAPGSFARRFSPASAFASLGGLL 78
           A    L++ L   A  ++LLA+W       WL T +L AP          SA  S G  L
Sbjct: 4   ATSSNLTQRLAPWALPVLLLAIWQLAVSAGWLSTRILPAP----------SAVVSAGVEL 53

Query: 79  LHS-DLPIHVYVSLQRIFIGLGFALAIGVPLGLAVGTFGALEAATTPAFQFLRMISPLSW 137
           + S ++  H+ +S  R  +G     +IG+ LG   G     E     + Q +R +  L+ 
Sbjct: 54  VRSGEIWTHLAISGWRAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLAL 113

Query: 138 MPLAVMVFGVGDRPIYFLLAFAAVWPILLSTAAGVRQLDPRWLLLARSLAATRWEMLSRV 197
           +PL ++ FG+ +    FL+A   ++PI L+T  G+R +DP  + +ARS   + + +  +V
Sbjct: 114 IPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQV 173

Query: 198 ILPGVTGHILTGVRLAIGILWIVLVPCEMLGVSAGLGYFILDTRDRLAYSELMAMVLLIG 257
           ILPG    IL GVR A+G +W+ L+  E +  +AG+GY  ++ R+ L    ++  ++L  
Sbjct: 174 ILPGALPSILVGVRFALGFMWLTLIVAETISANAGIGYLAMNAREFLQTDVVVLAIVLYA 233

Query: 258 VLGFALDALARALCRRW 274
           VLG   D  AR L R W
Sbjct: 234 VLGKIADLAARGLERVW 250