Pairwise Alignments

Query, 370 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 26/268 (9%)

Query: 64  IEKEFADDKDVKIEWTFFRGAGPALNESVASGQLDFFLLGDLPAIVGRARGLKHKFIFAT 123
           +EK  A  + VK+ W  F  AGP L E++++G +D     D P++  +A G K     A 
Sbjct: 60  LEKALAP-QGVKVSWHEF-AAGPQLLEALSTGAIDLGHAADAPSVFAQAAG-KPVVYLAA 116

Query: 124 GRNNP--IFLAVPTDSTITKVEDVKGKKVALFKGTNLQNATDRILALHGLSEKDV--RFI 179
            +  P  I L V     +  V+D+KGK+VA  +G N Q      L   GLS KD+   ++
Sbjct: 117 EQPYPRGIGLVVREQDHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYV 176

Query: 180 NLDANAAVAALTSGNVDAVFGGQEYLPLAAK--GVVKIVYTTKGDDPTLGRNSSYFV-TE 236
           N +A  AVAAL SG+V AV     +L  A    G+  +      D   L  N ++++ T 
Sbjct: 177 N-NAADAVAALQSGSVQAVTLWDPFLAAAESQPGLKNL-----RDGSGLSNNRTFYLSTA 230

Query: 237 AFAAAHPDLTQRVVTAFIKAAHFISQDQNRDEAFEAWALS---GLPKETFVTNFEGQRLS 293
           +FA  H    + ++  F      +SQ  N   A  A  L+   G+  +      E +  +
Sbjct: 231 SFADQH----RALLKTFFAELGKVSQWANAKPAEVAALLAPQLGISTQVLEVASERRNYN 286

Query: 294 LIVNPLIDDYVVARYKEQAQAAKDYGLL 321
            +    I   +VA  ++ A   +  GL+
Sbjct: 287 AVA---ITPQIVAEQQKLADTFQGLGLI 311