Pairwise Alignments

Query, 370 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 317 a.a., aliphatic sulfonate ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 93/325 (28%), Positives = 133/325 (40%), Gaps = 28/325 (8%)

Query: 1   MSALLRLVLRPFARAASALICLALLAAPAAAETVIRFGHPGVGAEQRPYSYGDATTYARA 60
           M A+ R  L     AA AL  L   AA AA E  I +   G+               AR 
Sbjct: 1   MPAITRRALSAGLIAAVALSVLPF-AAQAAEELKIGYQKTGL------------PVIARQ 47

Query: 61  RQLIEKEFADDKDVKIEWTFFRGAGPALNESVASGQLDFFLLGDLPAIVGRARGLKHKFI 120
           + +IEK   + K VK+ W  F  AGP L E++  G ++    GD P I G+A G    ++
Sbjct: 48  QGVIEKAL-EAKGVKVSWVEFT-AGPPLVEALNVGSINVGWTGDAPPIFGQAAGSAIVYV 105

Query: 121 FA---TGRNNPIFLAVPTDSTITKVEDVKGKKVALFKGTNLQNATDRILALHGLSEKDVR 177
            A    G+   IF     +S I  V D+KGKKV + KGT+  N     L  +GL   D+ 
Sbjct: 106 AALPSNGKGEAIF--TKPESGIKSVADLKGKKVGVGKGTSAHNLLVAALEKNGLKLSDID 163

Query: 178 FINLDANAAVAALTSGNVDAVFGGQEYLPLAAKGVVKIVYTTKGDDPTLGRNSSYFVTEA 237
              L    A AA  S  +DA      +  +A      +      D   L   + +     
Sbjct: 164 VTYLSPADAAAAFASDKIDAWAVWDPFYAIAETRYKPVTLARTSD--VLDVKTYFLANRD 221

Query: 238 FAAAHPDLTQRVVTAFIKAAHFISQDQNRDEAFEA-WALSGLPKETFVTNFEGQRLSLIV 296
           +A +H D     V A  +AA + +   NRD+   A   ++G+P E            +  
Sbjct: 222 YAKSHADTINTNVGALGEAAKWSA--ANRDKVAAALHEVTGVPLEAQTLAANRSEFGI-- 277

Query: 297 NPLIDDYVVARYKEQAQAAKDYGLL 321
              IDD +VA  +E A      GL+
Sbjct: 278 -TRIDDKIVASQQETADRFYRLGLI 301