Pairwise Alignments

Query, 274 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 282 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

 Score =  142 bits (357), Expect = 1e-38
 Identities = 96/271 (35%), Positives = 130/271 (47%), Gaps = 7/271 (2%)

Query: 1   MSIEAAAATTLPAEARASTTLRTVTRRIDWR------PWTAFAALLALWFAAHHFGWVPA 54
           MS EA     L  +  A T      RRI  R      PW    AL+ALWFA    GW+ A
Sbjct: 1   MSAEAELRAVLQRQDPAPTRAPLPWRRIAARATDAALPWLLPVALVALWFAGADRGWISA 60

Query: 55  KYLPSPLAVVQRLIREVTAGTLLHDLHDTLRRNLSGLVIGVAAGLALGALLGASSLVGRI 114
           + LP P  V   L    T+G L   +  +  R   G + G   GLALG+ +G S      
Sbjct: 61  QVLPPPQFVWDTLRDLATSGDLWLHVSTSFTRVGVGFIAGTLLGLALGSAMGLSHRFEAY 120

Query: 115 VGPTVLAQRQTALFAWVPLLAMWFGGGDTGKITFIAVAAFQPVVIGTWRGISLVPATFRE 174
           V PT  A  Q  + AW+P + +  G G+  K   IA AA  PV + T +G    P   RE
Sbjct: 121 VLPTFNALVQIPVLAWLPFVLLIVGIGEPLKYILIAKAALVPVALNTLQGFRQTPVALRE 180

Query: 175 LSDVLLLSRWNYMRLVALPHALPMIFTGLHGALIYAWLATVGSELFLNISPGLGGRLNEG 234
           +  V   SR   +  + LPHA+P +FTG+      AWL+ V  EL  + S GLG  +  G
Sbjct: 181 VGQVYGYSRRQQVMEIVLPHAVPTLFTGVRLGFTKAWLSLVVVELVAS-SEGLGYLIVYG 239

Query: 235 SQLFEIDLLFLVILLFGLIGLGFNTLAERAE 265
            QLF++DL+   +++ G IG   + L +R E
Sbjct: 240 RQLFQLDLVMAAVIVVGAIGYAIDRLLDRLE 270