Pairwise Alignments

Query, 274 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 285 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  105 bits (261), Expect = 1e-27
 Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 1/233 (0%)

Query: 39  LLALWFAAHHFGWVPAKYLPSPLAVVQRLIREVTAGTLLHDLHDTLRRNLSGLVIGVAAG 98
           LL LW  A   G +P + + +P  +   L   + +G L H L  +L+R L GL IGV+ G
Sbjct: 47  LLLLWELASQTGLLPVRVIAAPSQIGGTLWSMIVSGELAHHLWVSLQRALLGLSIGVSIG 106

Query: 99  LALGALLGASSLVGRIVGPTVLAQRQTALFAWVPLLAMWFGGGDTGKITFIAVAAFQPVV 158
           +    + G S     ++   +   R     A VPL  +WFG G+  K+  I +    PV 
Sbjct: 107 VVAALVTGLSRRGEIVLDSPMQRLRTIPSLALVPLFILWFGIGEFTKVALIVMGTTFPVY 166

Query: 159 IGTWRGISLVPATFRELSDVLLLSRWNYMRLVALPHALPMIFTGLHGALIYAWLATVGSE 218
           +  + GI  +     E ++ L LSR   +  V LP +LP  F GL  +L  +WLA V  E
Sbjct: 167 LNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVE 226

Query: 219 LFLNISPGLGGRLNEGSQLFEIDLLFLVILLFGLIGLGFNTLAERAEGLLIRW 271
             +N + G+G   ++       D++ + +L++ ++GL  + +    E   + W
Sbjct: 227 Q-INTTAGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAW 278