Pairwise Alignments

Query, 283 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 2e-33
 Identities = 65/218 (29%), Positives = 113/218 (51%), Gaps = 4/218 (1%)

Query: 47  LVLWQTAATYKW----IDPVFLPAPLTVVTAFWKMLTKQKLAFDFLASINIVGQAFIYGS 102
           L+ WQ AA  K     +   ++P P  V+ A W++LT   L     +S+  V   +   +
Sbjct: 19  LLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLLAHLGSSLARVFAGYATAA 78

Query: 103 AAALLLGIAAGLSRKVEEFFGPTFDTIRHIPGIAWLPLIVLWLGIGAPAKILVIAKSVFF 162
              + LG+  G S+  E+   P  + +R IP +AW+PL +L       + + +      F
Sbjct: 79  LVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSSELSMVFITFTGALF 138

Query: 163 PVFLNTLQGIRNVEKNYIELAKVLTLTRWQLIRKVILPAAMPSIMVSLRYAAGLAWALVV 222
           P+ LNT+ G+  V+   +  A+ L   RW ++R+V+LP A+PSI+  L    G +W  +V
Sbjct: 139 PILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLV 198

Query: 223 VAEGLSGLEGLGFLIFRAQGLLLTDQLLVCMVIIGLVG 260
            AE +SG  G+G+  + +  L     ++V M++IG++G
Sbjct: 199 TAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLG 236