Pairwise Alignments

Query, 258 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

 Score =  143 bits (361), Expect = 4e-39
 Identities = 95/281 (33%), Positives = 144/281 (51%), Gaps = 31/281 (11%)

Query: 6   DVALEARDIGLKFGTFVALEGVTVTFQRGGITGIVGPNGAGKSTLFNVLGGQLRADTGAV 65
           D+ L   ++ ++FG   AL  V++  +R  I  ++GPNGAGK+T+FN L G  +A  G +
Sbjct: 4   DIILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRI 63

Query: 66  LLH------------GQDISRS------------------APHIRARHGLTRTFQISREL 95
            L+            G+    +                    H+  R GL RTFQ  R  
Sbjct: 64  ELNVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLF 123

Query: 96  GALTVLENLLLASPRQPGEGVLAALRGGASVRQAEDEAISRARALLERVSLWRLADSPAN 155
             ++V+ENLL+A        +LA +    + R+AE +A+  A   LE V L   A+  A 
Sbjct: 124 KEMSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCANRLAG 183

Query: 156 ALSGGQKKLLELCRALMLKPRIVLLDEPAAGVNPVLVGELGDFIRTLRDE-GLSFGIVEH 214
            LS GQ++ LE+ RA+  +P+I+ LDEPAAG+NP     L   IR LRDE  ++  ++EH
Sbjct: 184 ELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLIEH 243

Query: 215 NMDLIAALCDPIHVLAEGRLLTSGTFAEISSNARVTEAYLG 255
           +M ++ ++ D I VL  G ++  G   +I  N  V  AYLG
Sbjct: 244 DMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLG 284