Pairwise Alignments

Query, 258 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 305 a.a., ABC transporter nucleotide binding/ATPase (branched chain amino acid) from Agrobacterium fabrum C58

 Score =  159 bits (401), Expect = 8e-44
 Identities = 99/253 (39%), Positives = 138/253 (54%), Gaps = 1/253 (0%)

Query: 4   APDVALEARDIGLKFGTFVALEGVTVTFQRGGITGIVGPNGAGKSTLFNVLGGQLRADTG 63
           A  +ALE R I L FG   AL+ + +  + G I  I+GPNGAGKS+L NV+ G  R D G
Sbjct: 42  AEGLALELRGIDLSFGGIAALQDIDLAVRHGEIRAIIGPNGAGKSSLINVISGVYRPDRG 101

Query: 64  AVLLHGQDISRSAPHIRARHGLTRTFQISRELGALTVLENLLLASPRQPGEGVLAALRGG 123
            V + G           AR G+ RTFQ       L+VL+N+            L+ + G 
Sbjct: 102 YVAIDGTAYRPVPTQKLARLGVARTFQNLALFKGLSVLDNVAAGRAYVSRANFLSQVAGL 161

Query: 124 ASVRQAEDEAISRARALLERVSLWRLADSPANALSGGQKKLLELCRALMLKPRIVLLDEP 183
              R+ + +A  RA  +LE + L    D  A  L  G +K +EL RAL  +PRI+LLDEP
Sbjct: 162 PLARREQADARERAGRILEFLHLTPYVDRLAGTLPYGLQKRVELARALAAEPRILLLDEP 221

Query: 184 AAGVNPVLVGELGDFIRTLRDE-GLSFGIVEHNMDLIAALCDPIHVLAEGRLLTSGTFAE 242
            AG+      EL D++R  RDE  ++  ++EH++ ++  L D I VL  GR +  GT AE
Sbjct: 222 MAGMTATEKNELADYVRLARDEYAITVVLIEHDVGVVMGLSDRIAVLDYGRKIADGTPAE 281

Query: 243 ISSNARVTEAYLG 255
           I+S+ RV +AYLG
Sbjct: 282 IASDQRVIDAYLG 294